Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq854 114 2e-20
seq1582 98.7 1e-15
seq2114 93.3 5e-14
seq1630 93.3 5e-14
seq1277 93.3 5e-14
seq1237 93.3 5e-14
seq457 93.3 5e-14
seq402 93.3 5e-14
seq210 93.3 5e-14
seq681 82.4 9e-11
>seq854
Length=240782
Score = 114 bits (126), Expect = 2e-20
Identities = 384/588 (65%), Gaps = 25/588 (4%)
Strand=Plus/Plus
Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329
|||| || || ||| || | || || ||||| || || | |||||| || ||
Sbjct 75218 TGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTCGTCGCTGCTGG 75277
Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389
||||||||| |||||| || || | ||| ||||| ||| |||| |||| ||| |
Sbjct 75278 TGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGT 75337
Query 110390 TCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449
| || ||||| ||||| || |||||||||||||| || || ||||| ||||| |
Sbjct 75338 TGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGG 75397
Query 110450 ACTTGAGAATGGCCTTCCATACAT-CGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCC 110508
||| | ||||| | ||| || | | | | | || || || || | |||||
Sbjct 75398 ACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGC-TTGACGCGGCCTTCT 75456
Query 110509 TCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTA-CACATCAGAAAGACCCTT 110567
| |||||| |||||||| | | |||||| |||| || | ||| || || |||
Sbjct 75457 TTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCAC-TCGTTCAG-CCCGG 75514
Query 110568 CGCCTT-GTCGGGACAGAAGAGGGACCAAT-----TTCCACCCTCCTCAACCCTCTTCAT 110621
| || ||| ||||| | || ||||| | || || |||| ||||||| |||
Sbjct 75515 GACATTCGTCTGGACACATTAGAGACCAGTCCTGGTT--ACTCTCC---ACCCTCTCCAT 75569
Query 110622 GAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACC 110681
||||| |||||| |||||||| || |||||||||| | | | ||| || | ||
Sbjct 75570 GAACAAGTCAGGGATCCACATAGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCC 75629
Query 110682 TTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGAC 110741
||| | ||||| ||||| | ||||| || ||||| ||||| || || |
Sbjct 75630 AGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACAT 75689
Query 110742 AGCGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATT 110795
|||| | || ||| | || |||||| ||||||||||| ||| ||
Sbjct 75690 GGCGAAAGCCCCAGGCCTCTTGTTTCCAC---CCTGGTCCACATAGCGTGCGGTGTTGTT 75746
Query 110796 GAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACC 110843
| | || || ||||| || | || |||| ||| | ||||| || ||
Sbjct 75747 GTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCC 75794
>seq1582
Length=624914
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 143172 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTA 143231
Query 136777 GGGAACAGCTTTTA 136790
|| || ||||||
Sbjct 143232 CGGGCCAACTTTTA 143245
>seq2114
Length=798031
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 230269 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 230211
>seq1630
Length=32901
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 18548 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 18490
>seq1277
Length=850854
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 783170 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 783112
>seq1237
Length=357709
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 36267 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 36209
>seq457
Length=254894
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 101338 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 101280
>seq402
Length=184354
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 162088 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 162146
>seq210
Length=505556
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 101296 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 101354
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 102641 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 102699
>seq681
Length=269650
Score = 82.4 bits (90), Expect = 9e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811
||||||||| | ||||||| |||| |||| ||||| || ||||| || || |||||
Sbjct 111468 GTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTCCCCAGGATCTGGGCGGTGGA 111409
Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844
||||||||||||||||||| || || |||||
Sbjct 111408 GGCTGTGGGCATGGGAGCCAGCAGCAGGCTGTT 111376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588723240949600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |