Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1034 93.3 5e-14 >seq1034 Length=215700 Score = 93.3 bits (102), Expect = 5e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || || | ||||||||| | || | || ||||| ||||| ||||| | Sbjct 37276 CCTCATCTCTGCTGATGAGCTCATTAGAATAGGTGAGGCCCGGCATGAGTCCCCTTTTCT 37335 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | |||| | || || || || || ||||| ||||| || || || ||||||||||| | Sbjct 37336 TCAGCCAGTAGATGGACGCGAACGAGCCAGAGAAGAAGATGCCCTCCACTGCTGCAAATG 37395 Query 19103 CAACTAGTCTTTCTCC 19118 | || |||| ||| || Sbjct 37396 CCACCAGTCGTTCCCC 37411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561867571008480