Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2263 140 3e-27 seq538 111 1e-18 seq1101 104 2e-16 >seq2263 Length=104132 Score = 140 bits (154), Expect = 3e-27 Identities = 437/677 (65%), Gaps = 0/677 (0%) Strand=Plus/Plus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || ||||| || || ||||| || | || || || | || || ||| ||||| | Sbjct 15494 ACAGCTTGTGAGAGGGCCAAGAGAACCCTGTCCTCCAGCACCCAGGCCAGCATTGAGATC 15553 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 |||||| | |||||||| || || | | || | || | ||||| ||||| || Sbjct 15554 GATTCACTGTTTGAGGGCATCGACTTCTACACCTCCATCACCAGGGCTCGTTTTGAGGAG 15613 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 | ||| ||| || || ||| ||| | || || || || ||| | | |||| | Sbjct 15614 TTGTGTGGTGACCTTTTCAGAGGAACTCTGGATCCCGTGGAGAAAGCCCTGAAAGATGCC 15673 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 || || || || ||| | ||||| | || || |||||||| || |||||||| || Sbjct 15674 AAAATGGACAAGAGTAAAATCCATGATGTCGTTCTGGTTGGTGGTTCCACAAGAATCCCC 15733 Query 552153 AAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAAT 552212 ||||||| || | | || ||||| || || |||| || | || | || Sbjct 15734 AAAATTCAGAAACTCCTGCAGGATTTCTTCAAGGGCAAGGAATTGAACAAGAGCATCAAC 15793 Query 552213 CCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACT 552272 ||||| ||||| || || || ||||| || | ||||| || ||||| | ||| | Sbjct 15794 CCAGACGAGGCGGTGGCTTACGGTGCTGCCGTCCAAGCCGCCATTCTGACAGGAGACGTG 15853 Query 552273 GATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAA 552332 || || | || || | | || | ||||| | ||||| || || ||| | || Sbjct 15854 TCGGATAATATTCAGGATCTGCTTCTGCTGGATGTGGCCCCTCTGTCGCTGGGTATCGAG 15913 Query 552333 ACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAA 552392 |||| ||||| | |||||| | || || | || || || || || ||||||| Sbjct 15914 ACAGCAGGAGGAGTCATGACTGCCTTGATTGAGCGCAACACCACCATCCCCACTAAAAAA 15973 Query 552393 TCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAA 552452 | | || || | || ||||| || || || | | || || ||| | | |||| Sbjct 15974 ACACAGGTCTTCACCACCTATTCTGACAACCAGCCGGGGGTCCTCATCCAAGTGTATGAA 16033 Query 552453 GGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATT 552512 ||||||||| | || || || || || | || || | ||| | | || | Sbjct 16034 GGAGAAAGAGCCATGACCAAGGACAACAACCTCCTGGGCAAGTTTGAGCTGTCGGGCCTC 16093 Query 552513 CCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGA 552572 || |||||||| || || || ||||| || || || || ||||||||||||||||| || Sbjct 16094 CCGCCTGCTCCCCGAGGGGTCCCGCAGATCGAGGTCACCTTCGATATCGATGCCAACGGC 16153 Query 552573 ATTTTGAATGTGACTGC 552589 |||||||| ||| |||| Sbjct 16154 ATTTTGAACGTGTCTGC 16170 >seq538 Length=616578 Score = 111 bits (122), Expect = 1e-18 Identities = 430/673 (64%), Gaps = 2/673 (0%) Strand=Plus/Plus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || || ||||| | ||||| || |||| || || | || || ||| || ||| | Sbjct 527106 ACGGCCTGCGAGCGCGCCAAGCGGACTCTGTCCTCCAGCACCCAGGCCAGCATCGAAATC 527165 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 || || | |||||||| || || | | || | || | || ||| |||||||| Sbjct 527166 GACTCTCTGTTTGAGGGCATCGACTTCTACACCTCCATCACAAGAGCCCGGTTTGAAGAG 527225 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 | |||||| ||||| ||| ||| | || || ||||| | | ||| ||| | Sbjct 527226 CTCAATTCTGAGCTCTTCAGAGGAACCCTGGACCCGGTAGAGAAGGCTTTGCAGGATGCC 527285 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 ||| | |||||| ||| | || ||||| || ||||| ||||| || || |||||||| Sbjct 527286 AAGCTGGATAAAACCAGCATCCACGAAATCGTTCTTGTCGGTGGCTCCACGAGAATTCCC 527345 Query 552153 AAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAA 552211 ||||| | | | || || ||| ||| || || | | | | || | || | || Sbjct 527346 AAAATCCAAAAGCTCTTGCAGGACTTCTTT-AACGGCAGAGAGCTGAACAAGAGCATCAA 527404 Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAAC 552271 ||||||||| ||||| |||||||| || || | || || || || || || | || Sbjct 527405 TCCAGATGAAGCTGTGGCCTATGGCGCAGCGGTCCAGGCCGCCATCCTCATGGGCGACAC 527464 Query 552272 TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGA 552331 | || || | || || | | || | ||||| |||| || ||||| ||| | || Sbjct 527465 TTCAGAGAATGTCCAGGATCTCCTGCTGCTGGATGTGGCTCCGCTCTCTCTGGGTATCGA 527524 Query 552332 AACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAA 552391 || | || || | ||||| ||| ||| | | || || || || || || | Sbjct 527525 GACCGCCGGTGGGGTGATGACACCTCTCATCAAGCGGAACACCACCATCCCCACCAAGCA 527584 Query 552392 ATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGA 552451 | | | || || || || || || || || | | ||| ||||| | | ||| Sbjct 527585 GACCCAGATCTTCTCCACATACTCGGACAACCAGCCAGGTGTGCTGATTCAGGTGTATGA 527644 Query 552452 AGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT 552511 || || ||| | || || || || || | || || | ||| | | || || Sbjct 527645 GGGCGAGAGAGCCATGACCAAGGACAACAACCTCCTGGGCAAATTTGAACTCACCGGCAT 527704 Query 552512 TCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGG 552571 |||||| |||||||| || || ||||| || || || || ||||| ||||| ||||| || Sbjct 527705 TCCTCCCGCTCCTCGGGGCGTGCCGCAGATAGAGGTGACGTTCGACATCGACGCCAACGG 527764 Query 552572 AATTTTGAATGTG 552584 || |||| ||| Sbjct 527765 CATCCTGAACGTG 527777 >seq1101 Length=282054 Score = 104 bits (114), Expect = 2e-16 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| ||||| || || ||||| || || ||||| || || || ||||| || || |||| Sbjct 69101 ATGCTGTAATTACGGTGCCAGCCTACTTCAATGATTCGCAGCGCCAAGCCACAAAGGATG 69042 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || || |||| || |||||||| ||||| || |||||||| ||||||||||| Sbjct 69041 CCGGCACAATCTCTGGCCTCAATGTTCTGCGTATCATTAATGAACCAACTGCTGCTGCTA 68982 Query 550518 TTGCATATGG 550527 |||||||||| Sbjct 68981 TTGCATATGG 68972 Score = 86.0 bits (94), Expect = 5e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | ||||| || || ||||||||||| | ||| |||| ||||||||| Sbjct 69832 GGTATCGATCTGGGAACAACCTACTCCTGTGTTGGTGTGTTTCAACATGGAAAAGTTGAA 69773 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||||| || || || || || ||||||| || | Sbjct 69772 ATCATTGCCAATGATCAGGGCAACAGGACCACACCCAGCTACGTGGCTTTCACTGACTCA 69713 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAA 550144 || | |||| |||||||| ||| Sbjct 69712 GAGAGGCTGATTGGAGATGCAGCCAAA 69686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027480369002680