Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq746 156 3e-33
seq1131 102 7e-17
>seq746
Length=686128
Score = 156 bits (172), Expect = 3e-33
Identities = 144/181 (80%), Gaps = 1/181 (1%)
Strand=Plus/Plus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
||||| ||||||||| || || || ||||||||||||||||||||||| || ||||| ||
Sbjct 480722 CATGTTCGTGTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATC 480781
Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269
|||||| || | || || ||| ||||||| ||| | || ||||||||||| ||
Sbjct 480782 TCCCTCCTCTCGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTC 480841
Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 30329
||| |||||||| || ||||| ||||||||||||| |||||||| || ||| || | ||
Sbjct 480842 CCAAATCTTTACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCC-CTGCCGCAACA 480900
Query 30330 C 30330
|
Sbjct 480901 C 480901
Score = 149 bits (164), Expect = 5e-31
Identities = 130/162 (80%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928
|| || |||| || || |||||||| || || || | |||||||||||||| |||||
Sbjct 480276 AGGCCTGTGATATGTGCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAAGGGC 480335
Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988
|||||||| ||||| |||||||| | |||||| ||||| ||||| ||||| ||||| | |
Sbjct 480336 ACCCCGAGGCCCATATCCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCACAC 480395
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG 30030
||||| ||||| |||| | |||||| || || |||||||||
Sbjct 480396 ACGTAGAACTGGCACAGAGCGTGGCAGGGTGGCAGAGCCATG 480437
>seq1131
Length=190588
Score = 102 bits (112), Expect = 7e-17
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 112111 CTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAAC 112170
|||||||| || | ||| ||||||| |||||||| || |||| ||||||||||||
Sbjct 8132 CTGCTGAGAACGATGTTGATCCTGTTGGCCAGAGGTCGGTTTCTTTCTGGGATGGAGAAC 8191
Query 112171 CAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
|| |||||||| ||||| ||||||||||||||||| |||
Sbjct 8192 CAGGTCTTTCTGCCCATGATCACCACGTTCTGCTTCCCT 8230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408446625713036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |