Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq746 156 3e-33 seq1131 102 7e-17 >seq746 Length=686128 Score = 156 bits (172), Expect = 3e-33 Identities = 144/181 (80%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||||| ||||||||| || || || ||||||||||||||||||||||| || ||||| || Sbjct 480722 CATGTTCGTGTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATC 480781 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 |||||| || | || || ||| ||||||| ||| | || ||||||||||| || Sbjct 480782 TCCCTCCTCTCGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTC 480841 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 30329 ||| |||||||| || ||||| ||||||||||||| |||||||| || ||| || | || Sbjct 480842 CCAAATCTTTACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCC-CTGCCGCAACA 480900 Query 30330 C 30330 | Sbjct 480901 C 480901 Score = 149 bits (164), Expect = 5e-31 Identities = 130/162 (80%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||| || || |||||||| || || || | |||||||||||||| ||||| Sbjct 480276 AGGCCTGTGATATGTGCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAAGGGC 480335 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 |||||||| ||||| |||||||| | |||||| ||||| ||||| ||||| ||||| | | Sbjct 480336 ACCCCGAGGCCCATATCCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCACAC 480395 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG 30030 ||||| ||||| |||| | |||||| || || ||||||||| Sbjct 480396 ACGTAGAACTGGCACAGAGCGTGGCAGGGTGGCAGAGCCATG 480437 >seq1131 Length=190588 Score = 102 bits (112), Expect = 7e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 112111 CTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAAC 112170 |||||||| || | ||| ||||||| |||||||| || |||| |||||||||||| Sbjct 8132 CTGCTGAGAACGATGTTGATCCTGTTGGCCAGAGGTCGGTTTCTTTCTGGGATGGAGAAC 8191 Query 112171 CAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 || |||||||| ||||| ||||||||||||||||| ||| Sbjct 8192 CAGGTCTTTCTGCCCATGATCACCACGTTCTGCTTCCCT 8230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408446625713036