Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq81 120 2e-22 >seq81 Length=187384 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| |||| || || | | |||| |||| ||| Sbjct 173150 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGC 173091 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||| ||||| || ||||||||||| || || || || || Sbjct 173090 TTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTG 173031 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | ||||| |||||||||| || ||||| || Sbjct 173030 GCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTC 172971 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | ||||||||||| ||||||||| Sbjct 172970 AGGGTTTTTACAAAGATCTGCATG 172947 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| |||| || || | | |||| |||| ||| Sbjct 173378 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGC 173319 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||| ||||| || ||||||||||| || || || || || Sbjct 173318 TTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTG 173259 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| | ||||| |||||||||| || ||||| || Sbjct 173258 GCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTC 173199 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | ||||||||||| ||||||||| Sbjct 173198 AGGGTTTTTACAAAGATCTGCATG 173175 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| |||| || || | | |||| |||| ||| Sbjct 173606 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGC 173547 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||| ||||| || ||||||||||| || || || || || Sbjct 173546 TTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTG 173487 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| | ||||| |||||||||| || ||||| || Sbjct 173486 GCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTC 173427 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | ||||||||||| ||||||||| Sbjct 173426 AGGGTTTTTACAAAGATCTGCATG 173403 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| |||| || || | | |||| |||| ||| Sbjct 173834 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGC 173775 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||| ||||| || ||||||||||| || || || || || Sbjct 173774 TTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTG 173715 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| | ||||| |||||||||| || ||||| || Sbjct 173714 GCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTC 173655 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | ||||||||||| ||||||||| Sbjct 173654 AGGGTTTTTACAAAGATCTGCATG 173631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396112588696524