Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq854 280 3e-70 seq30465 187 5e-42 seq13819 187 5e-42 seq912 118 2e-21 seq681 113 8e-20 seq208 104 4e-17 seq1034 98.7 2e-15 seq24387 91.5 3e-13 seq5320 91.5 3e-13 seq1534 89.7 1e-12 >seq854 Length=240782 Score = 280 bits (310), Expect = 3e-70 Identities = 1008/1560 (65%), Gaps = 42/1560 (3%) Strand=Plus/Plus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTAT 212917 ||||||||||||||| | ||||| | |||| |||| |||||||||||||| || Sbjct 74615 CATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACAAT 74674 Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || || || || ||||| | ||| | ||| ||||||| ||||| Sbjct 74675 CTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGA 74734 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||| ||||| ||||| || || ||| |||||||| || || | || ||||| Sbjct 74735 CTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGACT 74794 Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGA 213097 ||||||||| ||||||| | |||| | ||| ||||||| | ||| Sbjct 74795 GTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCAA-----CAGG 74849 Query 213098 CAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCT 213157 ||| |||| ||| | ||||||||| |||| | |||||| ||||| || ||| Sbjct 74850 TCGGTGGGCGTC-TTCTC---CCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGGA 74905 Query 213158 GCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGC----A 213213 ||| | ||| | ||| || || || | Sbjct 74906 GCCTTCGTAGGTTTCGTACGGCCCGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGA 74965 Query 213214 GGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACG 213273 |||| |||||||||||||| || || |||| |||| || || || || ||| Sbjct 74966 GGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTT 75025 Query 213274 TGAA-GGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATG 213332 ||| ||| | | |||| | ||| | || |||| |||||||| ||||| || || Sbjct 75026 CGAACGGGTAACG-CATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATT 75084 Query 213333 GGTCTGTGTCTCAGGTTAGACTTGG-AGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGAT 213391 || ||||| | | ||| ||||| ||| || || || || | || || || Sbjct 75085 GGCCTGTGGCGCTTGTTGGACTTCTCAGCT-TCGGGCACTGGATAGTAATTAATATCTAT 75143 Query 213392 GATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAA 213451 ||||||||| | ||| | | || ||||| ||| || || | | | | | || Sbjct 75144 GATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTT-GAAAGTCAA 75202 Query 213452 CACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGC 213511 | || | | | || || || || |||| | |||||| || ||||| || Sbjct 75203 AA-GTCCGCTCAGCGGTG-ACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGC 75260 Query 213512 CACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGT 213571 ||||| | | ||||| |||| || || ||||| || ||||||| |||||| Sbjct 75261 TACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGT 75320 Query 213572 GCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGA 213631 |||||| ||||| ||||| ||| ||| | ||| |||||||||||||| || | Sbjct 75321 GCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGT 75380 Query 213632 CCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACC 213689 ||||| || ||||||| | | | |||| ||| | | | |||||| ||||| Sbjct 75381 GCCGGTTTCAGTCTGGGACTCTATGA--TGGCATGCCAAACCTGCTGGGCCTTCACCACA 75438 Query 213690 CGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCC 213749 ||| |||| || | | | |||||| | |||||||| | || || | ||| Sbjct 75439 CGCTTGAC-GCGGCCTTCTT--TCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCC 75495 Query 213750 CAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCA-TC 213808 ||| | || ||| || ||||| | |||||||| || ||||||| || | || Sbjct 75496 CAGCACTCGTTCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTC 75555 Query 213809 TCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCT 213868 || || |||| |||||||| ||| |||| ||||| ||| ||| ||||| |||| || Sbjct 75556 TC-CACCCTCTCCATGAACAAGTCAGGGATCCACATAGCGTAGAAAAGGTCTCTGGCTCT 75614 Query 213869 CCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCA 213928 | ||| || ||||| ||| || || || || |||||||| || || | ||||| Sbjct 75615 CTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCA 75674 Query 213929 CGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCAC-CAGCC 213984 || |||| ||| ||||| || || || ||||||||| || ||||||||||| ||| Sbjct 75675 GGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCG 75734 Query 213985 TGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTC 214044 | || ||||| | | | ||| | ||| || ||||| ||||| | || ||||| | Sbjct 75735 T-GCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGC 75793 Query 214045 CCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGT 214104 | || || || || | | || | | ||| | || | || || || || || Sbjct 75794 CAGCGATGTAACTTCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCG 75853 Query 214105 ACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTG 214164 |||||||||| | ||||| | ||| || || ||||| | ||||||||||| Sbjct 75854 ACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCT 75913 Query 214165 TGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCG 214224 | | | |||| ||||||||| || ||||| |||||| | || | || || || | Sbjct 75914 TCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTG 75973 Query 214225 TGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGG 214284 | ||| ||||||| | | |||| | || || || ||||||| || | ||| Sbjct 75974 TCGGGGAGGCATGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCAT 76033 Query 214285 GGATGTCGTGCTTG-TGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCT 214343 || || || ||| |||||| | || |||||| ||||||||||| || | ||| Sbjct 76034 CAATATC-TGTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTC- 76091 Query 214344 ATGGGTCCTTT---GGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAG 214400 || |||| | | ||| | ||||||||| |||||||| || || || || ||| Sbjct 76092 --GGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAG 76149 >seq30465 Length=768 Score = 187 bits (206), Expect = 5e-42 Identities = 177/225 (79%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 241403 CACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCG 241462 |||||||| || ||| | ||||||||||||||||||||| ||||| || | |||||| Sbjct 231 CACATGTGTCAT--GACTTTCTGTTTGAGTTGGGCCACCTGCTCCCGGAGCAGGGACGCC 174 Query 241463 GTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCG 241522 || || || ||||| || ||||| | || ||||| ||||| || |||||||| || | | Sbjct 173 GTGTTAGAAAGTCCCGCATTGTCCGTTTTCAGCACTTTCACCTTGTCCTCCAGGCGAGAG 114 Query 241523 ATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTA 241582 ||||| ||||||||||| | || ||||||| ||| || | || |||| || | ||| Sbjct 113 ATGCGCTCCAGTTTGCGTCTCCGACATTTGGAGGCGGCGATCCGATTCCTCAGCCGCTTG 54 Query 241583 CGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 || || ||||||||||| |||||||| |||||||||| ||| ||| Sbjct 53 CGCTCGGCCTTGATGCGCTCCTGGTCTTCCATGTCGAGCGGGGAC 9 >seq13819 Length=611 Score = 187 bits (206), Expect = 5e-42 Identities = 177/225 (79%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 241403 CACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCG 241462 |||||||| || ||| | ||||||||||||||||||||| ||||| || | |||||| Sbjct 382 CACATGTGTCAT--GACTTTCTGTTTGAGTTGGGCCACCTGCTCCCGGAGCAGGGACGCC 439 Query 241463 GTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCG 241522 || || || ||||| || ||||| | || ||||| ||||| || |||||||| || | | Sbjct 440 GTGTTAGAAAGTCCCGCATTGTCCGTTTTCAGCACTTTCACCTTGTCCTCCAGGCGAGAG 499 Query 241523 ATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTA 241582 ||||| ||||||||||| | || ||||||| ||| || | || |||| || | ||| Sbjct 500 ATGCGCTCCAGTTTGCGTCTCCGACATTTGGAGGCGGCGATCCGATTCCTCAGCCGCTTG 559 Query 241583 CGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 || || ||||||||||| |||||||| |||||||||| ||| ||| Sbjct 560 CGCTCGGCCTTGATGCGCTCCTGGTCTTCCATGTCGAGCGGGGAC 604 >seq912 Length=429190 Score = 118 bits (130), Expect = 2e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477 |||| ||| || || ||||||||||| || ||||| | | ||||| | ||| | Sbjct 26570 ACCTTCTGCTTCAGCTGGGCCACCTGTTCGCGCAGCATGTTGGCGGTGGACGCCAGCTCC 26511 Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 | ||| | ||||||||| ||||||||| ||||||||||| | ||| || ||||| || Sbjct 26510 GAGTTCTGAGACTTGAGGGTCTTCACTTTATCCTCCAGCCGAGAGATTCGCTCCAGCTTC 26451 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 | |||||||||| ||| || | |||||| | | || ||| | || |||||||| Sbjct 26450 CTTTTCCGGCATTTGGAGGCAGCGATGCGGTTTCTCATTCGCTTTCTCTCGGCCTTGATC 26391 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 | || ||| |||||||||||| || ||| Sbjct 26390 CTCTCTTGGCTCTCCATGTCGATAGGGGAC 26361 >seq681 Length=269650 Score = 113 bits (124), Expect = 8e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 ||| || || || ||||| ||||| | | ||| | ||| ||||||| ||||||| Sbjct 111498 CTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATGGA 111439 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||||||||| ||||| || ||| |||||||||||||||||||| ||| || || Sbjct 111438 CTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAGGCT 111379 Query 213038 GTTCCTCACTCCGTG 213052 |||||| || || || Sbjct 111378 GTTCCTGACGCCATG 111364 Score = 93.3 bits (102), Expect = 8e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||| | ||||| |||||||| |||||| || |||||||||||||||||| ||| Sbjct 110556 GTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGG 110497 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCT 213641 || ||| |||| | ||||||||||||||||| || | ||||| ||| Sbjct 110496 TTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTCT 110443 Score = 87.8 bits (96), Expect = 3e-12 Identities = 118/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||||||| ||| |||| ||| ||||||||||| ||||| ||||| |||| ||||| Sbjct 111068 GCCAGCTCACAGCTGGCCTCCAGAGCAGCGTAGTAAATGGTCTCAAAGATCTGAATGTTG 111009 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCA-TCATGCGTTGGAACACATCAGCCAG 213310 ||| || |||||||||| | | || || | |||| | ||| | || ||||| Sbjct 111008 AGCAGCTGGGCCTCTGGGCTTTCGTATGG-ATGACGCATGAGGATGAAGGCGTCGGCCAG 110950 Query 213311 CCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA 213352 ||||| |||||||| || || || ||||| | || ||| || Sbjct 110949 ACCCTGCACCCCGATTCCAATCGGCCTGTGACGCATGTTTGA 110908 >seq208 Length=1056413 Score = 104 bits (114), Expect = 4e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477 |||| ||| || || |||||||| || |||| || ||| || || | ||| | Sbjct 272143 ACCTTCTGCTTCAGCTGGGCCACTTGCTCCCTGAGGACGCTGGCCGTCGATGCCAGCTCC 272084 Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 | ||| | | || || ||| || || |||||||| || | || | ||||| || Sbjct 272083 GTGTTCTGCGTTTTCAGGCTCTTGACCTTGTCCTCCAGTCGAGATATCCTCTCCAGCTTC 272024 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 | |||||| |||| |||||| | |||||||| || || || | |||||||||||| Sbjct 272023 CTTTTGCGGCACTTGGAGGCTGCTATCCGGTTCCGCAGCCTTTTCCTCTCCGCCTTGATG 271964 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 || ||||||| |||||||||||||||||| Sbjct 271963 CGCTCCTGGTTGTCCATGTCGATCGGAGAC 271934 >seq1034 Length=215700 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || || | |||||||||| | || || || ||| || ||||||| ||||| | || Sbjct 37278 TCATCTCTGCTGATGAGCTCATTAGAATAGGTGAGGCCCGGCATGAGTCCCCTTTTCTTC 37337 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||| | || | |||||| ||||||||||||||||||||||||||||| || || || Sbjct 37338 AGCCAGTAGATGGACGCGAACGAGCCAGAGAAGAAGATGCCCTCCACTGCTGCAAATGC 37396 >seq24387 Length=333 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| || |||||||||||||| ||||| ||||||| ||||||||||| Sbjct 204 CTGGTACTCGCCCACCCTCTTCTCAAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTC 145 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| |||||||| Sbjct 144 CATGAAGTCAAAGGGGTT 127 >seq5320 Length=369 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| || |||||||||||||| ||||| ||||||| ||||||||||| Sbjct 223 CTGGTACTCGCCCACCCTCTTCTCAAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTC 164 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| |||||||| Sbjct 163 CATGAAGTCAAAGGGGTT 146 >seq1534 Length=15379 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| | |||||||||| ||||||||||| || || ||||| | ||||| | || Sbjct 8669 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCCCTTTTCTTC 8728 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||||| || | || || || ||||||||||| || |||||||| || || || || Sbjct 8729 AGCCAGAAGATGGAAGCAAAGGACCCAGAGAAGAAAATACCCTCCACGGCAGCAAAGGC 8787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931133032698880