Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1534 127 4e-24
seq1034 109 1e-18
seq681 95.1 2e-14
>seq1534
Length=15379
Score = 127 bits (140), Expect = 4e-24
Identities = 112/137 (82%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| |||||||||||||||| |||||||| || || ||| || || |||||
Sbjct 8802 GGAGAGCGCGTGGTAGCCTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGGTCCTTTGCT 8743
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCT 25991
||||||||||||| ||| | |||||| | |||||||| ||| ||| |||||||||||
Sbjct 8742 TCCATCTTCTGGCTGAAGAA-AAGGGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCT 8684
Query 25992 CATCAGCAGGGACGAGG 26008
||||||||| |||||||
Sbjct 8683 CATCAGCAGAGACGAGG 8667
>seq1034
Length=215700
Score = 109 bits (120), Expect = 1e-18
Identities = 108/137 (79%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| || || ||||| || ||||| || |||||||||||||| ||| || ||||| |||
Sbjct 37411 GGGGAACGACTGGTGGCATTTGCAGCAGTGGAGGGCATCTTCTTCTCTGGCTCGTTCGCG 37352
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991
|||||| |||||| ||| | |||||||| |||||| || || || ||| || |||||
Sbjct 37351 TCCATCTACTGGCTGAAGAA-AAGGGGACTCATGCCGGGCCTCACCTATTCTAATGAGCT 37293
Query 25992 CATCAGCAGGGACGAGG 26008
||||||||| || ||||
Sbjct 37292 CATCAGCAGAGATGAGG 37276
>seq681
Length=269650
Score = 95.1 bits (104), Expect = 2e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 221123 ACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATG 221182
|| || || ||||||||||| ||||| | | ||| | ||| ||| | | ||||||
Sbjct 111500 ACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATG 111441
Query 221183 CTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGA 221242
||||||||| ||||||||||| || ||| ||| ||||||||||| |||| ||||||
Sbjct 111440 GACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAGG 111381
Query 221243 CTGTT 221247
|||||
Sbjct 111380 CTGTT 111376
Score = 87.8 bits (96), Expect = 3e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 222040 CATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCAC 222099
||| |||||||| |||||||||| || || |||||||||| || |||||||||
Sbjct 110127 CATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTGCTCCTCTTT 110068
Query 222100 GCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATA 222159
||| |||| || |||| |||| ||| |||| | || | |||||||||||||| ||
Sbjct 110067 GCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGGCTCCAGGTA 110008
Query 222160 GACGGCCAGAGCGCCGGGTCGCT 222182
|| || | || || |||| ||
Sbjct 110007 CACAGCAAAGGCTCCAGGTCTCT 109985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928446186254080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |