Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1534 127 4e-24 seq1034 109 1e-18 seq681 95.1 2e-14 >seq1534 Length=15379 Score = 127 bits (140), Expect = 4e-24 Identities = 112/137 (82%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||||||||||||||| |||||||| || || ||| || || ||||| Sbjct 8802 GGAGAGCGCGTGGTAGCCTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGGTCCTTTGCT 8743 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 ||||||||||||| ||| | |||||| | |||||||| ||| ||| ||||||||||| Sbjct 8742 TCCATCTTCTGGCTGAAGAA-AAGGGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCT 8684 Query 25992 CATCAGCAGGGACGAGG 26008 ||||||||| ||||||| Sbjct 8683 CATCAGCAGAGACGAGG 8667 >seq1034 Length=215700 Score = 109 bits (120), Expect = 1e-18 Identities = 108/137 (79%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || || || ||||| || ||||| || |||||||||||||| ||| || ||||| ||| Sbjct 37411 GGGGAACGACTGGTGGCATTTGCAGCAGTGGAGGGCATCTTCTTCTCTGGCTCGTTCGCG 37352 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 |||||| |||||| ||| | |||||||| |||||| || || || ||| || ||||| Sbjct 37351 TCCATCTACTGGCTGAAGAA-AAGGGGACTCATGCCGGGCCTCACCTATTCTAATGAGCT 37293 Query 25992 CATCAGCAGGGACGAGG 26008 ||||||||| || |||| Sbjct 37292 CATCAGCAGAGATGAGG 37276 >seq681 Length=269650 Score = 95.1 bits (104), Expect = 2e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 221123 ACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATG 221182 || || || ||||||||||| ||||| | | ||| | ||| ||| | | |||||| Sbjct 111500 ACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATG 111441 Query 221183 CTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGA 221242 ||||||||| ||||||||||| || ||| ||| ||||||||||| |||| |||||| Sbjct 111440 GACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAGG 111381 Query 221243 CTGTT 221247 ||||| Sbjct 111380 CTGTT 111376 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 222040 CATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCAC 222099 ||| |||||||| |||||||||| || || |||||||||| || ||||||||| Sbjct 110127 CATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTGCTCCTCTTT 110068 Query 222100 GCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATA 222159 ||| |||| || |||| |||| ||| |||| | || | |||||||||||||| || Sbjct 110067 GCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGGCTCCAGGTA 110008 Query 222160 GACGGCCAGAGCGCCGGGTCGCT 222182 || || | || || |||| || Sbjct 110007 CACAGCAAAGGCTCCAGGTCTCT 109985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928446186254080