Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_019529.1
Length=111506
Score E
Sequences producing significant alignments: (Bits) Value
seq1238 84.2 2e-11
seq2028 82.4 5e-11
>seq1238
Length=71492
Score = 84.2 bits (92), Expect = 2e-11
Identities = 198/290 (68%), Gaps = 18/290 (6%)
Strand=Plus/Minus
Query 108272 AGCAGCAGAAGCAACTGGTCAAGCAGGTACAGCTACAGAACAAGCAAAAGCAGCGAAGGC 108331
|||||||| | || | | | ||||| |||| ||| | |||| |||||| | ||
Sbjct 52329 AGCAGCAGCAACAGCAGCTACAGCAG---CAGCAGCAGTAGCAGCAGCAGCAGCTACAGC 52273
Query 108332 ATCTgcaacaaaagcag-agcaagaacaaca--agcagcactagcagcccaaaaggcagc 108388
| | |||||| ||||| |||| | | ||| ||||||| |||||| | |||||
Sbjct 52272 AGCAGCAACAGCAGCAGCAGCAGCAGCTACAGCAGCAGCAGCAGCAGCTACAGTAGCAGC 52213
Query 108389 agaaaaagcGAGAGACGCAGCTAAATCTTCTGAAACAGCAGCAGCTCAATCAGCAG--GC 108446
|| | ||| | || ||||| | || | | | ||||||||||| | |||||| ||
Sbjct 52212 AGCAGCAGCTACAGCAGCAGCAGCAGCTACAGCAGCAGCAGCAGCTACAGCAGCAGCAGC 52153
Query 108447 AGC----GCATATAGCTACCAACAG--GCAGCTAAAGCATCTGAAGATAAAGCAGACCAA 108500
||| ||| ||||| || ||| ||||||| |||| | | || || ||||| ||
Sbjct 52152 AGCTACAGCA-GCAGCTAGCAGCAGCAGCAGCTACAGCAGCAGCAGCTACAGCAG--CAG 52096
Query 108501 TACCAAGCTGCGGCAGCCACTTCAGCCGCAGATGCAGCTGCATCAGCAGC 108550
| | ||| || ||||| || |||| |||| | |||| ||| |||||||
Sbjct 52095 CAGC-AGCAGCAGCAGCTACAGCAGCAGCAGCTACAGCAGCAGCAGCAGC 52047
>seq2028
Length=14448
Score = 82.4 bits (90), Expect = 5e-11
Identities = 222/325 (68%), Gaps = 20/325 (6%)
Strand=Plus/Minus
Query 108272 AGCAGCAGAAGCAACTGGTCAAGCAGGTACAGCTACAGAACAAGCAAAAGCAGCGAAGGC 108331
|||||||| |||| || ||||| ||||||||| | |||| |||||| | ||
Sbjct 856 AGCAGCAGCAGCAGCTACAGCAGCAGCAGCAGCTACAGCAGCAGCAGCAGCAGCTACAGC 797
Query 108332 ATCTgcaacaaaagcag-agcaagaacaacaagcagca-ctagcagcccaaaaggcagca 108389
| | ||| | | ||||| ||| | | || || |||||| ||| |||| | ||||||
Sbjct 796 AGCAGCAGCTACAGCAGCAGCTACAGCAGCA-GCAGCAGCTA-CAGCAGCA---GCAGCA 742
Query 108390 gaaaaagcG--AG-AGACGCAGCTAAATCTTCTGAA---ACAGCAGCAGCTCAATCAGCA 108443
| | ||| || || ||||||| | | | | | |||||||||||| | |||||
Sbjct 741 GCTACAGCAGCAGCAGCAGCAGCTACAGCAGCAGCAGCTACAGCAGCAGCTACAGCAGCA 682
Query 108444 GGCAGCGCATATAGCTACCAACAG--GCAGCTAAAGCATCTGAAGATAAAGCAGACCAAT 108501
||||| || ||| | || ||| ||||||| |||| | | || || ||||| ||
Sbjct 681 -GCAGCAGCTACAGC-AGCAGCAGCAGCAGCTACAGCAGCAGCAGCTACAGCAG--CAGC 626
Query 108502 ACCAAGCTGCGGCAGCCACTTCAGCCGCAGATGCAGCTGCATCAGCAGCGTCAATGACAC 108561
| | ||| || ||||| || |||| |||| ||||| ||| ||||||| || |||
Sbjct 625 AGC-AGCAGCAGCAGCAGCTACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTACAG 567
Query 108562 AATCTGTAGCAGACGCAACAGCAGC 108586
| | | ||||| || ||||||||
Sbjct 566 CAGCAGCAGCAGCAGCTACAGCAGC 542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356545151483284
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