Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq854 183 4e-41 >seq854 Length=240782 Score = 183 bits (202), Expect = 4e-41 Identities = 685/1058 (65%), Gaps = 36/1058 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||| |||| | | || ||||| ||| |||||| | | Sbjct 76085 CCGCAGCACATGCTCATGAGGGTTTCTGTGGGGATCCATCAAACAGATATTGATGCAGCG 76026 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || ||| || | |||| | | || ||||| || || | || || ||||| Sbjct 76025 ATTGAAACCTACAACCTGCTGTCAGAGAAGTG-GTTCACCCATGCCTCCCCGACACTCTT 75967 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||| ||||| || || ||| ||||||| |||||||| |||||| ||||| || Sbjct 75966 TAATGCAGGTACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGA 75907 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | || || |||| || || | |||| |||| ||||| |||| |||||| Sbjct 75906 CAGCATCGAGGGCATTTATGACACGCTGAAACAGTGCGCGCTCATCTCCAAGTCGGCTGG 75847 Query 75451 GGGTATTGGGATGCACATCCATGATG--TGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || || || || | || | || | ||| | | | | || || || Sbjct 75846 AGGAATCGGTGTGGCCGTCA--GCTGCATCAGATCTACGGGAAGTTACATCGCTGGCACC 75789 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 ||||| | || |||| || | || ||||| | || | ||| ||| || |||||| Sbjct 75788 AATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACAACACCGCACGCTAT 75729 Query 75569 GTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | || ||| | |||| ||| | |||| | ||| ||||||| ||| Sbjct 75728 GTGGACCA---GGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACCTGGAACCCTGG 75672 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||| ||||||| | || ||||| ||||| | || ||| || | || ||| | Sbjct 75671 CATTCCGATATATTTGACTTCCTGGAGTTGAAGAAG-AACACTGGAAAAGAGGAGCAGAG 75613 Query 75682 GTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 ||||| || || | | ||||||| || ||| | |||||| || |||| ||| Sbjct 75612 AGCCAGAGACCTTTTCTACGCTATGTGGATCCCTGACTTGTTCATGGAGAGGGT---GGA 75556 Query 75742 GGGTGGTCAA---TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGG 75797 | || || |||||||| | ||||||||| | || || || ||| || | Sbjct 75555 GAGTAACCAGGACTGGTCTCTAATGTGTCCAGACGAATGTCCCGGGCTGAACGAGTGCTG 75496 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857 ||| ||||||||||| |||||||| || || || | || || | | ||| ||| Sbjct 75495 GGGG-GAGGAGTTTGAGAAGCTCTACACCAAATACGAGAAAGAAGGCCGCGTCAA-GCGT 75438 Query 75858 CTGTACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 || || | | | | |||||| | || || | | || ||||| || || || || Sbjct 75437 GTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATAGAGTCCCAGACTGAAACCGGCACT 75378 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 ||||| ||||| ||||| ||||| || || | |||||| ||||| ||||| |||| || Sbjct 75377 CCATACATGCTCTACAAAGATGCCTGCAATAGGAAGAGCAACCAGCAGAATCTGGGCACC 75318 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||||||||| ||||| ||||| |||||| | || ||||| | || ||| || Sbjct 75317 ATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAATACACCAGCAGCGACGAGGTAGCN 75258 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTT 76096 ||||| ||| |||| || |||| || | ||| |||| | ||| || |||||| Sbjct 75257 GTTTGTAATCTGGCCTCCGTCGCACTCAACATGTACGTCACCGCTGAG---CGGACTTTT 75201 Query 76097 GATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156 || | | ||||||| || | || ||| | ||| |||||| | ||| |||| Sbjct 75200 GACTTTCAAAAACTAGCTGCTGTGACCAAGGTAGTTGTCAAAAACTTGAACAAGATCATA 75141 Query 76157 GACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 || | |||| ||||| || || ||| | ||||| || | ||| ||||| || Sbjct 75140 GATATTAATTACTATCCAGTGCCCGAAGCTGAG---AAGTCCAACAAGCGCCACAGGCCA 75084 Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT 76251 || || | ||||| || ||| | || || | ||| || Sbjct 75083 ATAGGAATCGGTGTCCAGGGTTTGGCCGACGCATTCAT 75046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596313582156160