Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq81 140 2e-28 seq1349 91.5 1e-13 >seq81 Length=187384 Score = 140 bits (154), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||| ||||| | |||| ||||||||| ||||| ||||| || Sbjct 173174 CCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173115 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| || || |||||||| | ||||| || | || Sbjct 173114 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173055 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || |||||||| | || || || || || || || | ||| ||| ||| | Sbjct 173054 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCCA 172997 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | |||| || |||||||| || || ||||| |||||||||||||||||| Sbjct 172996 CCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 172947 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||| ||||| | |||| ||||||||| ||||| ||||| || Sbjct 173402 CCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173343 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| || || |||||||| | ||||| || | || Sbjct 173342 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173283 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | || ||| ||| || Sbjct 173282 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173223 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || |||||||| || || ||||| |||||||||||||||||| Sbjct 173222 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173175 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||| ||||| | |||| ||||||||| ||||| ||||| || Sbjct 173630 CCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173571 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| || || |||||||| | ||||| || | || Sbjct 173570 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173511 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | || ||| ||| || Sbjct 173510 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173451 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || |||||||| || || ||||| |||||||||||||||||| Sbjct 173450 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173403 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||| ||||| | |||| ||||||||| ||||| ||||| || Sbjct 173858 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173799 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| || || |||||||| | ||||| || | || Sbjct 173798 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173739 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | || ||| ||| || Sbjct 173738 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173679 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || |||||||| || || ||||| |||||||||||||||||| Sbjct 173678 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173631 >seq1349 Length=1030505 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| |||||| ||||||||| ||||| ||| || ||| ||| |||| ||||| Sbjct 331928 AGGTGGATGGTGGACTCCTTCTGGATGTTGTAGGTGGAGAGGTTGCCTCCATCCTCCAGC 331987 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || |||||||| || ||| || | || | |||||||| ||| || Sbjct 331988 TGCTTAGTAGCAAAGATCAGACGCTGCAGGAAAGGAGGGATTCCCTCCTTATCGCAGATC 332047 Query 34892 TTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTC 34949 || ||||| || || || ||||| | || || || ||||| |||||||| | Sbjct 332048 TTGGCCTTGAC--ATTCTCAATGCTGTCATTTGGTTCCACCTCCACGGTGATGGTCTTGC 332105 Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || |||||| |||||||||||||| Sbjct 332106 CAATGTAGGTCTTCACAAAGATCTGCAT 332133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325556523211508