Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq81 140 2e-28
seq1349 91.5 1e-13
>seq81
Length=187384
Score = 140 bits (154), Expect = 2e-28
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||| ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 173174 CCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173115
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || || |||||||| | ||||| || | ||
Sbjct 173114 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173055
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | || || || || || || || | ||| ||| ||| |
Sbjct 173054 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCCA 172997
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| |||| || |||||||| || || ||||| ||||||||||||||||||
Sbjct 172996 CCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 172947
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||| ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 173402 CCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173343
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || || |||||||| | ||||| || | ||
Sbjct 173342 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173283
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | || | || ||| ||| ||
Sbjct 173282 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173223
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || |||||||| || || ||||| ||||||||||||||||||
Sbjct 173222 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173175
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||| ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 173630 CCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173571
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || || |||||||| | ||||| || | ||
Sbjct 173570 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173511
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | || | || ||| ||| ||
Sbjct 173510 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173451
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || |||||||| || || ||||| ||||||||||||||||||
Sbjct 173450 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173403
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||| ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 173858 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173799
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || || |||||||| | ||||| || | ||
Sbjct 173798 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173739
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | || | || ||| ||| ||
Sbjct 173738 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173679
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || |||||||| || || ||||| ||||||||||||||||||
Sbjct 173678 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173631
>seq1349
Length=1030505
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831
||||| |||||| ||||||||| ||||| ||| || ||| ||| |||| |||||
Sbjct 331928 AGGTGGATGGTGGACTCCTTCTGGATGTTGTAGGTGGAGAGGTTGCCTCCATCCTCCAGC 331987
Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891
||||| || |||||||| || ||| || | || | |||||||| ||| ||
Sbjct 331988 TGCTTAGTAGCAAAGATCAGACGCTGCAGGAAAGGAGGGATTCCCTCCTTATCGCAGATC 332047
Query 34892 TTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTC 34949
|| ||||| || || || ||||| | || || || ||||| |||||||| |
Sbjct 332048 TTGGCCTTGAC--ATTCTCAATGCTGTCATTTGGTTCCACCTCCACGGTGATGGTCTTGC 332105
Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || |||||| ||||||||||||||
Sbjct 332106 CAATGTAGGTCTTCACAAAGATCTGCAT 332133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325556523211508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |