Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1101 109 4e-18 seq820 91.5 1e-12 >seq1101 Length=282054 Score = 109 bits (120), Expect = 4e-18 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| |||| |||||||||||||||||||||||| || | || |||||| || |||| Sbjct 68972 CCATATGCAATAGCAGCAGCAGTTGGTTCATTAATGATACGCAGAACATTGAGGCCAGAG 69031 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 ||| | || ||||| || |||||||| | || ||||| || || || || || || ||| Sbjct 69032 ATTGTGCCGGCATCCTTTGTGGCTTGGCGCTGCGAATCATTGAAGTAGGCTGGCACCGTA 69091 Query 282464 ATAACGGCAT 282473 || || |||| Sbjct 69092 ATTACAGCAT 69101 Score = 96.9 bits (106), Expect = 3e-14 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||| | || ||||| || || | ||| | || | ||||||||||||||||||||| Sbjct 69649 CAAACACTGTGTTGGTGGGGTTCATGGCAACCTGGTTTTTGGCTGCATCTCCAATCAGCC 69708 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 |||| || || || | || || || || || | || || |||||||| |||| Sbjct 69709 TCTCTGAGTCAGTGAAAGCCACGTAGCTGGGTGTGGTCCTGTTGCCCTGATCATTGGCAA 69768 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 | ||||||||||| |||| ||| | ||||| ||||| | |||||||| | ||| | Sbjct 69769 TGATTTCAACTTTTCCATGTTGAAACACACCAACACAGGAGTAGGTTGTTCCCAGATCGA 69828 Query 282870 TACCAA 282875 |||||| Sbjct 69829 TACCAA 69834 >seq820 Length=630633 Score = 91.5 bits (100), Expect = 1e-12 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475 ||| || || |||| |||||||||||| ||||||||||| | ||||| || || ||||| Sbjct 247004 TTTGTCGGCTGCAGACACATTAAGAATGCCATTGGCATCAATGTCAAAGGTCACCTCAAT 247063 Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535 || ||||| ||||| | |||||||| ||||| || | ||| | |||| |||| Sbjct 247064 CTGGGGGACGCCTCTGGGTGCAGGTGGAATCCCAGTCAGCTCAAACTTGCCCAAGATATT 247123 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTC 281565 ||| || || || | || |||||| || Sbjct 247124 ATTGTCCTTGGTCATGGCTCTTTCACCTTC 247153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3738944843887032