Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq1101 109 4e-18
seq820 91.5 1e-12
>seq1101
Length=282054
Score = 109 bits (120), Expect = 4e-18
Identities = 102/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403
||||| |||| |||||||||||||||||||||||| || | || |||||| || ||||
Sbjct 68972 CCATATGCAATAGCAGCAGCAGTTGGTTCATTAATGATACGCAGAACATTGAGGCCAGAG 69031
Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463
||| | || ||||| || |||||||| | || ||||| || || || || || || |||
Sbjct 69032 ATTGTGCCGGCATCCTTTGTGGCTTGGCGCTGCGAATCATTGAAGTAGGCTGGCACCGTA 69091
Query 282464 ATAACGGCAT 282473
|| || ||||
Sbjct 69092 ATTACAGCAT 69101
Score = 96.9 bits (106), Expect = 3e-14
Identities = 133/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749
|||| | || ||||| || || | ||| | || | |||||||||||||||||||||
Sbjct 69649 CAAACACTGTGTTGGTGGGGTTCATGGCAACCTGGTTTTTGGCTGCATCTCCAATCAGCC 69708
Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809
|||| || || || | || || || || || | || || |||||||| ||||
Sbjct 69709 TCTCTGAGTCAGTGAAAGCCACGTAGCTGGGTGTGGTCCTGTTGCCCTGATCATTGGCAA 69768
Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869
| ||||||||||| |||| ||| | ||||| ||||| | |||||||| | ||| |
Sbjct 69769 TGATTTCAACTTTTCCATGTTGAAACACACCAACACAGGAGTAGGTTGTTCCCAGATCGA 69828
Query 282870 TACCAA 282875
||||||
Sbjct 69829 TACCAA 69834
>seq820
Length=630633
Score = 91.5 bits (100), Expect = 1e-12
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475
||| || || |||| |||||||||||| ||||||||||| | ||||| || || |||||
Sbjct 247004 TTTGTCGGCTGCAGACACATTAAGAATGCCATTGGCATCAATGTCAAAGGTCACCTCAAT 247063
Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535
|| ||||| ||||| | |||||||| ||||| || | ||| | |||| ||||
Sbjct 247064 CTGGGGGACGCCTCTGGGTGCAGGTGGAATCCCAGTCAGCTCAAACTTGCCCAAGATATT 247123
Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTC 281565
||| || || || | || |||||| ||
Sbjct 247124 ATTGTCCTTGGTCATGGCTCTTTCACCTTC 247153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3738944843887032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |