Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq81 138 1e-27 seq681 122 8e-23 seq1349 91.5 1e-13 >seq81 Length=187384 Score = 138 bits (152), Expect = 1e-27 Identities = 152/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 173373 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 173315 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||| || || || |||||||||||||| |||||| || Sbjct 173314 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 173255 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| |||||| |||||||||| || | |||| ||| ||||| ||||| | Sbjct 173254 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 173195 Query 133642 TTTTTACGAAAATCTGCATG 133661 ||||||| || ||||||||| Sbjct 173194 TTTTTACAAAGATCTGCATG 173175 Score = 138 bits (152), Expect = 1e-27 Identities = 152/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 173601 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 173543 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||| || || || |||||||||||||| |||||| || Sbjct 173542 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 173483 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| |||||| |||||||||| || | |||| ||| ||||| ||||| | Sbjct 173482 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 173423 Query 133642 TTTTTACGAAAATCTGCATG 133661 ||||||| || ||||||||| Sbjct 173422 TTTTTACAAAGATCTGCATG 173403 Score = 138 bits (152), Expect = 1e-27 Identities = 152/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 173829 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 173771 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||| || || || |||||||||||||| |||||| || Sbjct 173770 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 173711 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| |||||| |||||||||| || | |||| ||| ||||| ||||| | Sbjct 173710 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 173651 Query 133642 TTTTTACGAAAATCTGCATG 133661 ||||||| || ||||||||| Sbjct 173650 TTTTTACAAAGATCTGCATG 173631 Score = 132 bits (146), Expect = 5e-26 Identities = 151/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 173145 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 173087 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||| || || || |||||||||||||| |||||| || Sbjct 173086 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 173027 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| ||||| |||||||||| || | |||| ||| ||||| ||||| | Sbjct 173026 TCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 172967 Query 133642 TTTTTACGAAAATCTGCATG 133661 ||||||| || ||||||||| Sbjct 172966 TTTTTACAAAGATCTGCATG 172947 >seq681 Length=269650 Score = 122 bits (134), Expect = 8e-23 Identities = 94/112 (84%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923 |||||||||| ||||| | ||||||||||||| ||||||| ||||| ||||| || | Sbjct 110555 TGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGT 110496 Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975 ||||||| |||||||| ||||||||||| |||||||| ||| ||| ||||| Sbjct 110495 TGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTC 110444 >seq1349 Length=1030505 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||| |||| ||||| || ||||| || | ||| ||||| ||||||||||| Sbjct 331260 GGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCCTGCAGCTGCTTGCC 331319 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| |||||||| || |||||||| || ||||| || |||||| ||| Sbjct 331320 AGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCATGGATCTTGACCTT 331379 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | | ||| |||| |||| ||||| | | ||| ||| ||| | ||||| || Sbjct 331380 GATATTCACAATGCTGTCATTGGGTTCCACATGCAGACTGATGGTCTTGTCAGTCAGGGT 331439 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 331440 CTTCACAAATATCTGCAT 331457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483213339963680