Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq81 138 1e-27
seq681 122 8e-23
seq1349 91.5 1e-13
>seq81
Length=187384
Score = 138 bits (152), Expect = 1e-27
Identities = 152/200 (76%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| | ||| | | | || || ||||||||||
Sbjct 173373 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 173315
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| || || || |||||||||||||| |||||| ||
Sbjct 173314 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 173255
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| |||||| |||||||||| || | |||| ||| ||||| ||||| |
Sbjct 173254 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 173195
Query 133642 TTTTTACGAAAATCTGCATG 133661
||||||| || |||||||||
Sbjct 173194 TTTTTACAAAGATCTGCATG 173175
Score = 138 bits (152), Expect = 1e-27
Identities = 152/200 (76%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| | ||| | | | || || ||||||||||
Sbjct 173601 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 173543
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| || || || |||||||||||||| |||||| ||
Sbjct 173542 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 173483
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| |||||| |||||||||| || | |||| ||| ||||| ||||| |
Sbjct 173482 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 173423
Query 133642 TTTTTACGAAAATCTGCATG 133661
||||||| || |||||||||
Sbjct 173422 TTTTTACAAAGATCTGCATG 173403
Score = 138 bits (152), Expect = 1e-27
Identities = 152/200 (76%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| | ||| | | | || || ||||||||||
Sbjct 173829 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 173771
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| || || || |||||||||||||| |||||| ||
Sbjct 173770 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 173711
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| |||||| |||||||||| || | |||| ||| ||||| ||||| |
Sbjct 173710 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 173651
Query 133642 TTTTTACGAAAATCTGCATG 133661
||||||| || |||||||||
Sbjct 173650 TTTTTACAAAGATCTGCATG 173631
Score = 132 bits (146), Expect = 5e-26
Identities = 151/200 (76%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| | ||| | | | || || ||||||||||
Sbjct 173145 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 173087
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| || || || |||||||||||||| |||||| ||
Sbjct 173086 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 173027
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| ||||| |||||||||| || | |||| ||| ||||| ||||| |
Sbjct 173026 TCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 172967
Query 133642 TTTTTACGAAAATCTGCATG 133661
||||||| || |||||||||
Sbjct 172966 TTTTTACAAAGATCTGCATG 172947
>seq681
Length=269650
Score = 122 bits (134), Expect = 8e-23
Identities = 94/112 (84%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923
|||||||||| ||||| | ||||||||||||| ||||||| ||||| ||||| || |
Sbjct 110555 TGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGT 110496
Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975
||||||| |||||||| ||||||||||| |||||||| ||| ||| |||||
Sbjct 110495 TGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTC 110444
>seq1349
Length=1030505
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||| |||| ||||| || ||||| || | ||| ||||| |||||||||||
Sbjct 331260 GGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCCTGCAGCTGCTTGCC 331319
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | ||||| |||||||| || |||||||| || ||||| || |||||| |||
Sbjct 331320 AGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCATGGATCTTGACCTT 331379
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | | ||| |||| |||| ||||| | | ||| ||| ||| | ||||| ||
Sbjct 331380 GATATTCACAATGCTGTCATTGGGTTCCACATGCAGACTGATGGTCTTGTCAGTCAGGGT 331439
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 331440 CTTCACAAATATCTGCAT 331457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483213339963680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |