Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq186 167 3e-36 >seq186 Length=681005 Score = 167 bits (184), Expect = 3e-36 Identities = 541/824 (66%), Gaps = 20/824 (2%) Strand=Plus/Plus Query 162172 TCCCCCGATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGG 162231 ||||| |||| |||| ||||| | | | || | ||| |||| || | || || Sbjct 384715 TCCCCTACTCCGTACACACACACCGCTCTCCTGTAGTCCCCGGTGCAGGGTCGGTATGGG 384774 Query 162232 GCCCCATCGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGC 162291 ||||| |||||||| ||| | |||| |||||| || | | | | ||| || Sbjct 384775 GCCCCCAGTTCCACATCACCCGCCAAGTAGCTCCACTTGACCACGCGCGCCAGGGCCAGC 384834 Query 162292 ATGTCGGAGGTGTCGTACTTG-TACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCT 162350 ||||| || |||||||||||| | || |||| | || || || |||| || Sbjct 384835 ATGTCCGACGTGTCGTACTTGCTGTTGTGG-GGCAATGACCCGGGGACTGTGGGCATCCT 384893 Query 162351 CTGTAGAGTAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAA 162410 ||| || || ||||||||||| ||||| ||||| || || |||||| |||||||| || Sbjct 384894 CTGCAGGGTGGCCCACAGGTGCTCGTCCGGACTGTAGGTGTCCTTCTCCCACTCCAGGAG 384953 Query 162411 CTCCCTGACCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTA 162470 |||| ||| || || | | || ||| | | || | ||| | | ||| Sbjct 384954 CTCCTGCACCTTTGCGTCTGTCATCACGTGTTGCACGAAAGTTCTCGACACCACGATGTA 385013 Query 162471 CGCGCTACCAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTT 162530 || | || || |||| ||| | ||| || ||||| |||| ||| || |||| Sbjct 385014 GGCANTTCCGGAGAACATGGGCGTTTTTATGGGCGGGGGG-CTTT-TCTCCACGTCTGTT 385071 Query 162531 GACT-ACCATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAG 162589 || | || | || |||| ||| | | ||||| |||| | || | | | Sbjct 385072 --CTGATCACCTCATCCGTGACCTGGTGGTGGTACAGCCACC-GGCCCTTTTTGTTCTCG 385128 Query 162590 ACGGGTGT-TCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATC 162648 || || |||| ||| | ||||| ||| || || ||||||| |||||||| Sbjct 385129 TTGGTGGTCTCGGACTCCATGCTGTTCATGCCCTTCAGGGTCTTCAGCGCCTGCACCATC 385188 Query 162649 TCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTA 162708 || ||||| || | ||| ||||||| ||||| || | | || ||||| ||| Sbjct 385189 TCCCTGTTGGTTTTGATGGGGAAGTCGGCCCCGCATGTGTTCAGCATGTACTTCCATTTA 385248 Query 162709 ACGCTG-AGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGA 162767 || || ||||| |||||| | ||||||| || ||||| ||||| |||||| Sbjct 385249 ACCTTGGAGTCCAG-CAGATCTCTCATGCAGTTCAAGTCCGCCTGTACGCGGGACCACGA 385307 Query 162768 CGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTAT 162827 ||||||||| ||||| || || | ||||| | || || || || || |||| || Sbjct 385308 CGCGTACACCACGCTTTCTAATTTGGTGGCCAGGAACACGTTAGGGAGGCAGGAAATAAT 385367 Query 162828 CCCCATCACGGCCAGTGAGAA--CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTAT 162885 ||||| |||||| ||| |||| | | |||| ||| || || |||||||| Sbjct 385368 CCCCACGACGGCCGCCTTGAATTCATCC--TTGGATTTCTGATCCACATGGACGCAGTAG 385425 Query 162886 AGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGT 162945 | |||||||||| ||||||||||| ||| | | |||||||||||| || || | || Sbjct 385426 ACGTTCTGAGGGGTGTAGATGGCCCGCAGGAGCCGCTCGAACATCTCGATGTTGTCATGG 385485 Query 162946 ACCACGATAGAATACGCTATGGGGAA----CTCAGCCTCCTCGC 162985 | ||| || || || || |||||||| ||| ||||||||| Sbjct 385486 ATCACCATGGAGTAAGCGATGGGGAAGTTTCTC-TCCTCCTCGC 385528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578183765907200