Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq776 104 7e-19 seq69 100 9e-18 seq26150 98.7 3e-17 seq9154 98.7 3e-17 seq9150 98.7 3e-17 seq4040 98.7 3e-17 seq848 98.7 3e-17 seq764 98.7 3e-17 seq591 98.7 3e-17 seq379 95.1 4e-16 seq991 93.3 1e-15 >seq776 Length=684434 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 568457 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 568516 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 568517 CCGGGTTTCGGC 568528 Score = 82.4 bits (90), Expect = 2e-12 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || || ||||| ||||||||| ||||||||||||||||||||||||||||| | ||||| Sbjct 551021 AAATACCTCAGATGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTTGATCCCGG 550962 Query 2833 GCTTCAGC 2840 | ||| || Sbjct 550961 GGTTCGGC 550954 >seq69 Length=407443 Score = 100 bits (110), Expect = 9e-18 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| | |||| ||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 36442 GCTGGAATAGCNCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 36501 Query 2829 CCGGGCTTCAGC 2840 ||||| | |||| Sbjct 36502 CCGGGTTCCAGC 36513 >seq26150 Length=394 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 122 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 63 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 62 CCGGGTTTCGGC 51 >seq9154 Length=2523 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1248 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1307 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1308 CCGGGTTTCGGC 1319 >seq9150 Length=711 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 92 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 151 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 152 CCGGGTTTCGGC 163 >seq4040 Length=779 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 623 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 564 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 563 CCGGGTTTCGGC 552 >seq848 Length=694256 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 138440 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 138499 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 138500 CCGGGTTTCGGC 138511 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 138792 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 138851 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 138852 CCGGGTTTCGGC 138863 >seq764 Length=26948 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 749 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 690 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 689 CCGGGTTTCGGC 678 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2260 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2201 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2200 CCGGGTTTCGGC 2189 >seq591 Length=311104 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 228460 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 228401 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 228400 CCGGGTTTCGGC 228389 >seq379 Length=1776537 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||||||||| |||||||| | | Sbjct 966285 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTNCCTGGTTCGATC 966226 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 966225 CCGGGTTTCGGC 966214 >seq991 Length=287809 Score = 93.3 bits (102), Expect = 1e-15 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTT-GGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 || ||| |||||||||| |||||||| |||||||||||||||||||||||||||||| | Sbjct 209471 GCCGAAATAGCTCAGTTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 209412 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 209411 CCCGGGTTTCGGC 209399 Score = 91.5 bits (100), Expect = 5e-15 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| | ||||||||||||| |||||||||||||| | Sbjct 176684 GGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCGAT 176625 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 176624 CCCGGGTTTCGGC 176612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15843648376140