Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq81 107 2e-18 seq681 102 8e-17 seq854 96.9 4e-15 >seq81 Length=187384 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || |||| || ||||| || ||||| ||||| || |||||||||||| Sbjct 173402 CCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173343 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | ||||||||| || || Sbjct 173342 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173283 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || || | |||||| | ||||| Sbjct 173282 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173223 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || || || | ||||| || || || ||||| Sbjct 173222 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173176 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || |||| || ||||| || ||||| ||||| || |||||||||||| Sbjct 173630 CCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173571 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | ||||||||| || || Sbjct 173570 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173511 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || || | |||||| | ||||| Sbjct 173510 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173451 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || || || | ||||| || || || ||||| Sbjct 173450 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173404 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || |||| || ||||| || ||||| ||||| || |||||||||||| Sbjct 173858 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173799 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | ||||||||| || || Sbjct 173798 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173739 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || || | |||||| | ||||| Sbjct 173738 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173679 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || || || | ||||| || || || ||||| Sbjct 173678 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173632 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || |||| || ||||| || ||||| ||||| || |||||||||||| Sbjct 173174 CCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173115 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | ||||||||| || || Sbjct 173114 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173055 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || || | ||||| | ||||| Sbjct 173054 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 172995 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || ||||| ||||| || || || | ||||| || || || ||||| || Sbjct 172994 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATGTT 172945 >seq681 Length=269650 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 |||||| ||||| | ||||| |||||||| | || |||||||| ||||| ||||| || Sbjct 110422 CGCCATCATCGAGTCTCAAACAGAAACCGGCACACCATACATGCTCTACAAGGACGCCTG 110481 Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351 |||| || ||||| || ||| |||||||||| | ||||||||||||| | || Sbjct 110482 CAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAATCTGTGCACAGA 110541 Query 8352 AATTGTACAGTACA 8365 |||||| |||||| Sbjct 110542 GATTGTAGAGTACA 110555 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 8541 ATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGC 8600 ||| |||||||| ||||| || |||| | || ||||| |||||||||||||| || Sbjct 110907 ATCAAACATGCGTCACAGGCCGATTGGAATCGGGGTGCAGGGTCTGGCCGACGCCTTCAT 110966 Query 8601 CATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGA 8660 | | |||| | || |||||||||| ||| || | |||||||||| | || || Sbjct 110967 CCTCATGCGTCATCCATACGAAAGCCCAGAGGCCCAGCTGCTCAACATTCAGATCTTTGA 111026 Query 8661 AACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTA 8720 || | || |||| || | || ||||||||| | || || ||||| || |||| Sbjct 111027 GACCATTTACTACGCTGCTCTGGAGGCCAGCTGTGAGCTGGCGGCTGAATTTGGGCCGTA 111086 Query 8721 CGAATCGTACGCGGGCAGCCCTGCCAGC 8748 ||| | || || ||| |||| |||| Sbjct 111087 TGAAACCTATGCTGGCTCTCCTGTCAGC 111114 >seq854 Length=240782 Score = 96.9 bits (106), Expect = 4e-15 Identities = 270/412 (66%), Gaps = 2/412 (0%) Strand=Plus/Minus Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583 |||| ||||||| ||||||||| || || || ||| || |||||||| || | || Sbjct 76122 CTACCTGTTGAAGATCAACGGCAAAGTGGCCGAGCGACCGCAGCACATGCTCATGAGGGT 76063 Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643 | ||||| || || ||| ||||| || || | ||||| ||| | || |||| Sbjct 76062 TTCTGTGGGGATCCATCAAACAGATATTGATGCAGCGATTGAAACCTACAACCTGCTGTC 76003 Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCA 7703 ||| ||| || || || || || || | ||| || || || ||| ||| || Sbjct 76002 AGAGAAGTGGTTCACCCATGCCTCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACA 75943 Query 7704 ATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACAC 7763 ||||| || || |||| ||||| || ||||||||||| |||||||| |||| Sbjct 75942 GCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGCATTTATGACAC 75883 Query 7764 GCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAACG 7822 |||| | ||||| || ||||| | |||| || ||||| ||| || ||| | | Sbjct 75882 GCTGAAACAGTGCGCGCTCATCTCCAAGT-CGGCTGGAGGAATCGGTGTGGCCGTCAGCT 75824 Query 7823 ACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGC 7882 | | | | | || || ||||| |||||| || || ||| || | | | Sbjct 75823 GCATCAGATCTACGGGAAGTTACATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCC 75764 Query 7883 CCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA 7934 ||||| || | || | ||| ||| | | || |||| |||||||| ||||| Sbjct 75763 CCATGCTGAGAGTTTACAACAACACCGCACGCTATGTGGACCAGGGTGGAAA 75712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505181508276640