Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq854 457 1e-123 seq1034 98.7 1e-15 seq681 93.3 6e-14 >seq854 Length=240782 Score = 457 bits (506), Expect = 1e-123 Identities = 1276/1957 (65%), Gaps = 34/1957 (2%) Strand=Plus/Plus Query 68651 TATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGAT 68710 |||| || || || || |||||||| |||||||| | || | ||||| || || | Sbjct 74608 TATTTTTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGT 74667 Query 68711 TAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTT 68770 | || || || || ||||| || | || || || ||||| || || ||||| || | || Sbjct 74668 TGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTT 74727 Query 68771 CCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCA 68830 | | ||| || || || ||||| || || || ||||| || || ||||| || || | | Sbjct 74728 CGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGA 74787 Query 68831 ATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAA 68890 | ||| || || | || || | |||||| || ||||| | ||||| ||| | | Sbjct 74788 GCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCAACA 74847 Query 68891 GATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATC 68950 | || | || | ||| | ||||| || || || || || || | || | Sbjct 74848 GGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGGAGC 74907 Query 68951 CATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCT----AAT 69006 | | || ||||| || || || | | Sbjct 74908 CTTCGTAGGTTTCGTACGGCCCGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGG 74967 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 || |||| || || || ||||| |||| | || ||| || ||||| | || ||| Sbjct 74968 GCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCG 75027 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 || || ||| | | || || ||||| || ||||| ||||| || || || || || || Sbjct 75028 AACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGC 75087 Query 69127 CTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 69186 || || | ||| || || | |||||||| || | ||||| |||||||||||||| || Sbjct 75088 CTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATC 75147 Query 69187 TTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT--- 69243 || || | ||| ||| ||||| || ||| | |||||| |||| ||||| Sbjct 75148 TTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTC 75207 Query 69244 CGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCA 69303 || || | | || |||| || ||||| || || || ||||||||||| |||||||| Sbjct 75208 CGCTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTCG 75267 Query 69304 TTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGA 69363 | | | |||| | || ||||| |||||||| || | ||||| || |||||| Sbjct 75268 TCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGA 75327 Query 69364 TTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTT 69423 || ||||| || ||||| | || ||||| || ||||| || || | ||||| || ||| Sbjct 75328 TTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTT 75387 Query 69424 TCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAA 69483 ||| |||| || || || || | | |||||| | || || | || |||| | Sbjct 75388 TCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGCTTG--A 75445 Query 69484 CGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCAT 69541 ||| | ||||| || |||| || || ||| || || || || ||||| || | Sbjct 75446 CGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGT 75505 Query 69542 CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTT 69601 || || |||||||| | ||||||||| | ||||| | | | | || || | | Sbjct 75506 TCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCT 75565 Query 69602 TCATAAATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660 ||| || | || || ||||| | ||| || ||| || ||||||| ||| | || || Sbjct 75566 CCATGAACAAGTCAGGGATCCACATAGCGTAGAAA-AGGTCTCTGGCTCTCTGCTCCTCT 75624 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 ||||| || || || || | || || || || | ||||| |||||||| ||||| || Sbjct 75625 TTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGG 75684 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || || || | | || || | || ||||| ||||| || | || | || ||||| Sbjct 75685 TACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTG 75744 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 || || ||||||||||| || | || ||||| || || ||||| || |||| || ||| Sbjct 75745 TTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAA 75804 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 ||||| | | | || || | | | ||| |||||||| ||| || ||||| Sbjct 75805 CTTCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATG 75864 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960 || || || |||||| |||||||| || ||||| ||||| ||||| ||||| || Sbjct 75865 AGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGC 75924 Query 69961 AGAAAACAGCTAGACATTTGATGA-TGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019 || || ||||| |||| || | ||| | || || |||||||| | ||| || || || Sbjct 75925 AGGAAGCAGCTGGACAGCTGTGGCCTGT-TGGTACCTGCATTAAAGAGTGTCGGGGAGGC 75983 Query 70020 GTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCA 70079 || |||||||| || || || ||||| ||||| |||||||| |||| || ||||| Sbjct 75984 ATGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTGT 76043 Query 70080 CTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATT 70139 ||||| || || | | || | ||| | ||| ||||| ||||| || || ||| Sbjct 76044 TTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCC 76103 Query 70140 ATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAA 70199 || || ||||||||||| || ||||| |||||||| || || | ||||| ||||| Sbjct 76104 GTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTACGAAAA 76163 Query 70200 GTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCAT 70259 || | || || || || | || || || || || | | | || || || Sbjct 76164 ATCGCGGTCATATATTATGGCCGAGTTCAGGCGGTCTTTGTTCTGGAGGACGATGTC--- 76220 Query 70260 AACAGT---AGGTGAGATAATCGGAGATCGTTTACCATTTTTA--GGATTAACATAGTTG 70314 || || |||| || ||||| || | | |||| || || | |||||| Sbjct 76221 AAGCGTCTCCTTGGAGACCATGGGAGA--GTGACGCTTATTTAGTGGGTTTATGTAGTTG 76278 Query 70315 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATG 70374 | | || ||||| || ||||| || | || ||||| |||||||| | ||||| | | Sbjct 76279 TACAGGTCCTCCATCACGTCACTGAACACCTTCTTTGTCTCCTTGTGCAGGTTTGAGACG 76338 Query 70375 GCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATT 70434 || || | || || || || || |||||||| |||| || || |||||| | | Sbjct 76339 GCGATCCGTGCAGCGAGGATGGCGTAGTCAGGGTGTTTGGTGGTCAGAGTAGCAGAGA-- 76396 Query 70435 TCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACT 70494 | || || || | || | || || ||||| || || | || || || || Sbjct 76397 -------CCAAGGTGTCGAGCTCCACNGTGGTGACTCCATTGTACAAACCCTGGATCACC 76449 Query 70495 TTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCTA 70554 ||||||| || | | || || | || || | ||| || || || || | || Sbjct 76450 TTCATGGTAATCTGGGCTGGGTCCACAAAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGG 76509 Query 70555 ATACGAGATGTAATTTTATCAAACATAACATTCTCCT 70591 || ||||| || |||||||| ||||| || ||||| Sbjct 76510 ATGCGAGAGGTGATTTTATCGAACATGACGCGCTCCT 76546 >seq1034 Length=215700 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| || || | || |||||| | ||||| || ||||| || || | || | Sbjct 37276 CCTCATCTCTGCTGATGAGCTCATTAGAATAGGTGAGGCCCGGCATGAGTCCCCTTTTCT 37335 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | ||||| | |||| || || || ||||| ||||||||||| || ||||||||||||| Sbjct 37336 TCAGCCAGTAGATGGACGCGAACGAGCCAGAGAAGAAGATGCCCTCCACTGCTGCAAATG 37395 Query 39759 CAACAAGTC 39767 | || |||| Sbjct 37396 CCACCAGTC 37404 >seq681 Length=269650 Score = 93.3 bits (102), Expect = 6e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384 |||||||| || ||||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 110544 ATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTG 110485 Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443 || |||||||||||||| || || | || || || ||||| | ||||| ||||| || Sbjct 110484 TTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTCTGTTTGAGACTCGATGAT 110426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686614013088480