Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq854 457 1e-123
seq1034 98.7 1e-15
seq681 93.3 6e-14
>seq854
Length=240782
Score = 457 bits (506), Expect = 1e-123
Identities = 1276/1957 (65%), Gaps = 34/1957 (2%)
Strand=Plus/Plus
Query 68651 TATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGAT 68710
|||| || || || || |||||||| |||||||| | || | ||||| || || |
Sbjct 74608 TATTTTTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGT 74667
Query 68711 TAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTT 68770
| || || || || ||||| || | || || || ||||| || || ||||| || | ||
Sbjct 74668 TGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTT 74727
Query 68771 CCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCA 68830
| | ||| || || || ||||| || || || ||||| || || ||||| || || | |
Sbjct 74728 CGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGA 74787
Query 68831 ATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAA 68890
| ||| || || | || || | |||||| || ||||| | ||||| ||| | |
Sbjct 74788 GCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCAACA 74847
Query 68891 GATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATC 68950
| || | || | ||| | ||||| || || || || || || | || |
Sbjct 74848 GGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGGAGC 74907
Query 68951 CATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCT----AAT 69006
| | || ||||| || || || | |
Sbjct 74908 CTTCGTAGGTTTCGTACGGCCCGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGG 74967
Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066
|| |||| || || || ||||| |||| | || ||| || ||||| | || |||
Sbjct 74968 GCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCG 75027
Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126
|| || ||| | | || || ||||| || ||||| ||||| || || || || || ||
Sbjct 75028 AACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGC 75087
Query 69127 CTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 69186
|| || | ||| || || | |||||||| || | ||||| |||||||||||||| ||
Sbjct 75088 CTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATC 75147
Query 69187 TTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT--- 69243
|| || | ||| ||| ||||| || ||| | |||||| |||| |||||
Sbjct 75148 TTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTC 75207
Query 69244 CGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCA 69303
|| || | | || |||| || ||||| || || || ||||||||||| ||||||||
Sbjct 75208 CGCTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTCG 75267
Query 69304 TTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGA 69363
| | | |||| | || ||||| |||||||| || | ||||| || ||||||
Sbjct 75268 TCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGA 75327
Query 69364 TTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTT 69423
|| ||||| || ||||| | || ||||| || ||||| || || | ||||| || |||
Sbjct 75328 TTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTT 75387
Query 69424 TCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAA 69483
||| |||| || || || || | | |||||| | || || | || |||| |
Sbjct 75388 TCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGCTTG--A 75445
Query 69484 CGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCAT 69541
||| | ||||| || |||| || || ||| || || || || ||||| || |
Sbjct 75446 CGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGT 75505
Query 69542 CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTT 69601
|| || |||||||| | ||||||||| | ||||| | | | | || || | |
Sbjct 75506 TCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCT 75565
Query 69602 TCATAAATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660
||| || | || || ||||| | ||| || ||| || ||||||| ||| | || ||
Sbjct 75566 CCATGAACAAGTCAGGGATCCACATAGCGTAGAAA-AGGTCTCTGGCTCTCTGCTCCTCT 75624
Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720
||||| || || || || | || || || || | ||||| |||||||| ||||| ||
Sbjct 75625 TTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGG 75684
Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780
|| || || | | || || | || ||||| ||||| || | || | || |||||
Sbjct 75685 TACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTG 75744
Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840
|| || ||||||||||| || | || ||||| || || ||||| || |||| || |||
Sbjct 75745 TTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAA 75804
Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900
||||| | | | || || | | | ||| |||||||| ||| || |||||
Sbjct 75805 CTTCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATG 75864
Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960
|| || || |||||| |||||||| || ||||| ||||| ||||| ||||| ||
Sbjct 75865 AGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGC 75924
Query 69961 AGAAAACAGCTAGACATTTGATGA-TGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019
|| || ||||| |||| || | ||| | || || |||||||| | ||| || || ||
Sbjct 75925 AGGAAGCAGCTGGACAGCTGTGGCCTGT-TGGTACCTGCATTAAAGAGTGTCGGGGAGGC 75983
Query 70020 GTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCA 70079
|| |||||||| || || || ||||| ||||| |||||||| |||| || |||||
Sbjct 75984 ATGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTGT 76043
Query 70080 CTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATT 70139
||||| || || | | || | ||| | ||| ||||| ||||| || || |||
Sbjct 76044 TTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCC 76103
Query 70140 ATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAA 70199
|| || ||||||||||| || ||||| |||||||| || || | ||||| |||||
Sbjct 76104 GTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTACGAAAA 76163
Query 70200 GTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCAT 70259
|| | || || || || | || || || || || | | | || || ||
Sbjct 76164 ATCGCGGTCATATATTATGGCCGAGTTCAGGCGGTCTTTGTTCTGGAGGACGATGTC--- 76220
Query 70260 AACAGT---AGGTGAGATAATCGGAGATCGTTTACCATTTTTA--GGATTAACATAGTTG 70314
|| || |||| || ||||| || | | |||| || || | ||||||
Sbjct 76221 AAGCGTCTCCTTGGAGACCATGGGAGA--GTGACGCTTATTTAGTGGGTTTATGTAGTTG 76278
Query 70315 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATG 70374
| | || ||||| || ||||| || | || ||||| |||||||| | ||||| | |
Sbjct 76279 TACAGGTCCTCCATCACGTCACTGAACACCTTCTTTGTCTCCTTGTGCAGGTTTGAGACG 76338
Query 70375 GCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATT 70434
|| || | || || || || || |||||||| |||| || || |||||| | |
Sbjct 76339 GCGATCCGTGCAGCGAGGATGGCGTAGTCAGGGTGTTTGGTGGTCAGAGTAGCAGAGA-- 76396
Query 70435 TCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACT 70494
| || || || | || | || || ||||| || || | || || || ||
Sbjct 76397 -------CCAAGGTGTCGAGCTCCACNGTGGTGACTCCATTGTACAAACCCTGGATCACC 76449
Query 70495 TTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCTA 70554
||||||| || | | || || | || || | ||| || || || || | ||
Sbjct 76450 TTCATGGTAATCTGGGCTGGGTCCACAAAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGG 76509
Query 70555 ATACGAGATGTAATTTTATCAAACATAACATTCTCCT 70591
|| ||||| || |||||||| ||||| || |||||
Sbjct 76510 ATGCGAGAGGTGATTTTATCGAACATGACGCGCTCCT 76546
>seq1034
Length=215700
Score = 98.7 bits (108), Expect = 1e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| || || | || |||||| | ||||| || ||||| || || | || |
Sbjct 37276 CCTCATCTCTGCTGATGAGCTCATTAGAATAGGTGAGGCCCGGCATGAGTCCCCTTTTCT 37335
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| ||||| | |||| || || || ||||| ||||||||||| || |||||||||||||
Sbjct 37336 TCAGCCAGTAGATGGACGCGAACGAGCCAGAGAAGAAGATGCCCTCCACTGCTGCAAATG 37395
Query 39759 CAACAAGTC 39767
| || ||||
Sbjct 37396 CCACCAGTC 37404
>seq681
Length=269650
Score = 93.3 bits (102), Expect = 6e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384
|||||||| || ||||| || ||||||| || ||||| || ||||| || ||||| ||
Sbjct 110544 ATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTG 110485
Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443
|| |||||||||||||| || || | || || || ||||| | ||||| ||||| ||
Sbjct 110484 TTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTCTGTTTGAGACTCGATGAT 110426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686614013088480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |