Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq854 114 1e-20
>seq854
Length=240782
Score = 114 bits (126), Expect = 1e-20
Identities = 442/682 (65%), Gaps = 31/682 (5%)
Strand=Plus/Plus
Query 131330 GACGCCAGATTACAAACTGCCGTTTCGTCATAATCGCAATACTGAACAATTTCGGCGCAC 131389
|| |||||||||||||| || ||||| | || | |||||||| | |||
Sbjct 75241 GAGGCCAGATTACAAACNGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCAT 75300
Query 131390 AAATTACTGCTCTTTATGGTGCCCAAATTTTGTTGATTGCTTTTAGCATTCACATGG-TC 131448
| ||| |||||||| |||||||||| ||| || || ||||| || ||| || | ||
Sbjct 75301 AGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTG-CAGGCATC 75359
Query 131449 CTTGTACATCATGTAGGGCGTGCCCGTTTCGACTTGAGTTTCAATAATGT-AT-CGAAA- 131505
||||| | |||||| || ||||| ||||| || | || || ||| || | |||
Sbjct 75360 TTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAAC 75419
Query 131506 -----GAGTTTTCGAGCAGACAATTGATATTTGTATTGGCCGCGTTTTTCGTAATTTTCG 131560
| | ||| | || || |||| |||| ||| ||||| || |
Sbjct 75420 CTGCTGGGCCTTC-ACCACACGCTTGACGC-------GGCCTTCTTTCTCGTATTTGGTG 75471
Query 131561 TACAACGTTTCAAAGTTTTGGCCAAACGAACT-GTCCAAATTGGGACATTCGCTGGGACA 131619
|| | | | ||||| | | || | | ||| || || |||||||||| |||||
Sbjct 75472 TAGAGCTTCTCAAACTCCTCCCCCCA-GCACTCGTTCAGCCCGGGACATTCGTCTGGACA 75530
Query 131620 CATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAA 131679
|||||| ||||| | ||| || || | || ||| ||||| || || | ||| |
Sbjct 75531 CATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTCCATGAACAAGTCAGGGATCCACAT 75590
Query 131680 CGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAA 131739
||||| || || ||||| ||| | | ||| ||| | || | | || ||||| | |
Sbjct 75591 AGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAG 75650
Query 131740 AAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGC-----GCCT-TT 131793
||||| || || || | |||||||||||||| |||| || | || |||| ||
Sbjct 75651 GAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTT 75710
Query 131794 GCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTC 131853
| || || || || | |||| || | |||||||||| || | || |||||| |
Sbjct 75711 G---TTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGAC 75767
Query 131854 CAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTG 131913
| || |||| ||| |||||||||| ||||| || || | | |||||| |
Sbjct 75768 AAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGATCTGATGCAGCT 75827
Query 131914 AACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGT 131972
||| | || || ||||| |||| | || ||||| || ||||| | | || ||||
Sbjct 75828 GACGGCCACACCGATTCCTCCAGCCG-ACTTGGAGATGAGCGCGCACTGTTTCAGCGTGT 75886
Query 131973 TATAGATACCTTCCACGCTGTC 131994
||| || || || | ||||||
Sbjct 75887 CATAAATGCCCTCGATGCTGTC 75908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424756598417184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |