Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq854 114 1e-20 >seq854 Length=240782 Score = 114 bits (126), Expect = 1e-20 Identities = 442/682 (65%), Gaps = 31/682 (5%) Strand=Plus/Plus Query 131330 GACGCCAGATTACAAACTGCCGTTTCGTCATAATCGCAATACTGAACAATTTCGGCGCAC 131389 || |||||||||||||| || ||||| | || | |||||||| | ||| Sbjct 75241 GAGGCCAGATTACAAACNGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCAT 75300 Query 131390 AAATTACTGCTCTTTATGGTGCCCAAATTTTGTTGATTGCTTTTAGCATTCACATGG-TC 131448 | ||| |||||||| |||||||||| ||| || || ||||| || ||| || | || Sbjct 75301 AGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTG-CAGGCATC 75359 Query 131449 CTTGTACATCATGTAGGGCGTGCCCGTTTCGACTTGAGTTTCAATAATGT-AT-CGAAA- 131505 ||||| | |||||| || ||||| ||||| || | || || ||| || | ||| Sbjct 75360 TTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAAC 75419 Query 131506 -----GAGTTTTCGAGCAGACAATTGATATTTGTATTGGCCGCGTTTTTCGTAATTTTCG 131560 | | ||| | || || |||| |||| ||| ||||| || | Sbjct 75420 CTGCTGGGCCTTC-ACCACACGCTTGACGC-------GGCCTTCTTTCTCGTATTTGGTG 75471 Query 131561 TACAACGTTTCAAAGTTTTGGCCAAACGAACT-GTCCAAATTGGGACATTCGCTGGGACA 131619 || | | | ||||| | | || | | ||| || || |||||||||| ||||| Sbjct 75472 TAGAGCTTCTCAAACTCCTCCCCCCA-GCACTCGTTCAGCCCGGGACATTCGTCTGGACA 75530 Query 131620 CATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAA 131679 |||||| ||||| | ||| || || | || ||| ||||| || || | ||| | Sbjct 75531 CATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTCCATGAACAAGTCAGGGATCCACAT 75590 Query 131680 CGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAA 131739 ||||| || || ||||| ||| | | ||| ||| | || | | || ||||| | | Sbjct 75591 AGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAG 75650 Query 131740 AAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGC-----GCCT-TT 131793 ||||| || || || | |||||||||||||| |||| || | || |||| || Sbjct 75651 GAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTT 75710 Query 131794 GCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTC 131853 | || || || || | |||| || | |||||||||| || | || |||||| | Sbjct 75711 G---TTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGAC 75767 Query 131854 CAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTG 131913 | || |||| ||| |||||||||| ||||| || || | | |||||| | Sbjct 75768 AAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGATCTGATGCAGCT 75827 Query 131914 AACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGT 131972 ||| | || || ||||| |||| | || ||||| || ||||| | | || |||| Sbjct 75828 GACGGCCACACCGATTCCTCCAGCCG-ACTTGGAGATGAGCGCGCACTGTTTCAGCGTGT 75886 Query 131973 TATAGATACCTTCCACGCTGTC 131994 ||| || || || | |||||| Sbjct 75887 CATAAATGCCCTCGATGCTGTC 75908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424756598417184