Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq854 172 7e-38 seq681 82.4 1e-10 >seq854 Length=240782 Score = 172 bits (190), Expect = 7e-38 Identities = 682/1055 (65%), Gaps = 30/1055 (3%) Strand=Plus/Plus Query 111044 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC 111103 || ||| | || || | ||| || ||||| | || || || ||||| ||| | || ||| Sbjct 75046 ATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGAC 75105 Query 111104 TTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTG 111160 || | ||| || || ||||| |||| | || |||| ||| | |||||| Sbjct 75106 TT---CTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTG 75162 Query 111161 GTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG 111220 ||| | ||| || | || ||||||| | | |||||||| || ||| | || Sbjct 75163 ACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCG---CTCAGCGGTG 75219 Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280 || ||| | || |||| || |||| ||| ||||| || ||| || | ||| Sbjct 75220 ACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTCGTCGCTGCTGGTG 75279 Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340 || || | ||||||||| |||| ||| ||||| || || |||| ||||| ||||| Sbjct 75280 TATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTG 75339 Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAT 111400 |||||| | ||||| ||||| |||||||||||||| || || || || || ||||| || Sbjct 75340 CTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGAC 75399 Query 111401 TTGAGAATAGCCTTCCAAACAT-CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC 111459 | | || || | |||||| | | | | || || || ||| | || || || Sbjct 75400 TCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGC-TTGACGCGGCCTTCTTT 75458 Query 111460 CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTG 111518 |||||| || |||||||| ||||||||||| ||| | || ||| || || || Sbjct 75459 CTCGTATTTGGTGTAGAGCTTCTCAAACTCCTC-CCCCCAGCACTCGTTCAGCCCGGGAC 75517 Query 111519 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAG 111576 | ||||||||| | |||||||| | || || ||| |||| || |||||| | Sbjct 75518 ATTCGTCTGGACACATTAGAGACCA--GTCCTGGTTACTCTCCACCCTCTCCATGAACAA 75575 Query 111577 GTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTT 111636 ||| || ||||||| | | || || ||||| | ||| || | || ||| Sbjct 75576 GTCAGGGATCCACATAGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTT 75635 Query 111637 GAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 111695 || | ||||| ||||| || | ||||| | ||||| || || || || | |||| Sbjct 75636 -CTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGA 75694 Query 111696 TAG----ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACG 111751 || | ||| | | ||| | || | |||||||| || ||| ||| | || Sbjct 75695 AAGCCCCAGGCCTCTTG-TTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACT 75753 Query 111752 CGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTG 111811 | ||||| || | || |||| || | ||||| || || || | | | Sbjct 75754 CTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTA 75813 Query 111812 GCTCTCA--CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 111869 | ||| | || | || | || || || || |||||| |||| ||||| |||| | Sbjct 75814 GATCTGATGCAGC--TGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGC 75871 Query 111870 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 111929 ||| | || || |||| || || | ||| ||| ||||| |||||| ||||||| Sbjct 75872 ACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGC 75931 Query 111930 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 111989 | ||||||| ||| || || ||||| ||||| ||||| || || | || || ||| Sbjct 75932 AGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGA 75991 Query 111990 ACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 112048 || || | | |||| | || ||| || || | | | |||||| ||| ||| Sbjct 75992 AC-CACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTGTTTGATGG 76050 Query 112049 ATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || || | | |||| ||||| ||||| ||| || Sbjct 76051 ATCCCCACAGAAACCCTCATGAGCATGTGCTGCGG 76085 >seq681 Length=269650 Score = 82.4 bits (90), Expect = 1e-10 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| || |||||||||| ||| ||||| || | ||| || || || || Sbjct 110569 CTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCC 110510 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || |||| ||||| |||||| ||||||| || ||||||||||||||||| || || || Sbjct 110509 CAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCC 110450 Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 || || || || || | || || || | ||| Sbjct 110449 GGTTTCTGTTTGAGACTCGATGATGGCGTACCA 110417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627762480067200