Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq854 150 2e-31
seq681 84.2 3e-11
>seq854
Length=240782
Score = 150 bits (166), Expect = 2e-31
Identities = 617/962 (64%), Gaps = 22/962 (2%)
Strand=Plus/Minus
Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373
||||| || || | || || ||||| ||||| ||||| || || || |||||||
Sbjct 75993 GTTCACCCATGCCTCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAG 75934
Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433
|||||||| |||||| ||||| ||| ||| | || || |||| || || | |
Sbjct 75933 CTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGCATTTATGACACGCTGAAACA 75874
Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATG--TGAGA 104491
||| |||| ||||| |||| |||||| || || || || | || | || | |||
Sbjct 75873 GTGCGCGCTCATCTCCAAGTCGGCTGGAGGAATCGGTGTGGCCGTCA--GCTGCATCAGA 75816
Query 104492 GCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTT 104551
| | | | || || || ||||| | || |||| || | || |||||
Sbjct 75815 TCTACGGGAAGTTACATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTG 75756
Query 104552 CGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAGGGAT----C 104607
| || | ||| ||| || |||||||| | || | ||| | | ||| | |
Sbjct 75755 AGAGTTTACAACAACACCGCACGCTATGTGGACCAGGGTGGAAA-CAAGAGGCCTGGGGC 75697
Query 104608 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCT 104667
| |||| | || || || || ||||| | ||||| | || ||||| ||||||
Sbjct 75696 TTTCGCCATGTACCTGGAACCCTGGCATTCCGATATATTTGACTTCCTGGAGTTGAAGAA 75637
Query 104668 CAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 104727
||| || | |||||| | | | | || || |||| |||| | ||||| || ||
Sbjct 75636 GAACACTGGAAAAGAGGAGCAGAGAGCCAGAGACCTTTTCTACGCTATGTGGATCCCTGA 75577
Query 104728 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACAA 104784
| |||||| |||| || ||||||| | | |||||||| | ||||||||| |
Sbjct 75576 CTTGTTCATGGAGAGGGT---GGAGAGTAACCAGGACTGGTCTCTAATGTGTCCAGACGA 75520
Query 104785 GGCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACG 104843
|| || || ||| ||| | ||| ||||||||||| || ||||| || ||||
Sbjct 75519 ATGTCCCGGGCTGAACGAGTGCTGGGGG-GAGGAGTTTGAGAAGCTCTACACCAAATACG 75461
Query 104844 AGGAAGAAGGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTC 104902
|| ||||||| || | | ||| |||| || | || ||| | || || |
Sbjct 75460 AGAAAGAAGGCCGCGTCAA-GCGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATA 75402
Query 104903 AAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAG 104962
|||| || || || || || || ||||||||||| |||||||| ||||| || |||
Sbjct 75401 GAGTCCCAGACTGAAACCGGCACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAG 75342
Query 104963 AGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAA 105022
|| || || ||||| |||| |||||||| |||||| || |||||||| |||||
Sbjct 75341 AGCAACCAGCAGAATCTGGGCACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAA 75282
Query 105023 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 105082
| || || || ||| || || ||||| || || || |||| ||| || |||
Sbjct 75281 TACACCAGCAGCGACGAGGTAGCNGTTTGTAATCTGGCCTCCGTCGCACTCAACATGTAC 75222
Query 105083 GTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 105142
|| | ||| ||| ||||| | | ||||||| | || || || ||
Sbjct 75221 GTCACCGCTGAG---CGGACTTTTGACTTTCAAAAACTAGCTGCTGTGACCAAGGTAGTT 75165
Query 105143 ACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA 105202
||||||| | |||| | || |||| |||| || || || ||| ||
Sbjct 75164 GTCAAAAACTTGAACAAGATCATAGATATTAATTACTATCCAGTGCCCGAAGCTGAGAAG 75105
Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT 105262
|| || | | | ||| | ||||| || ||||||| |||||| | || || | ||||||
Sbjct 75104 TCCAACAAGCGCCACAGGCCAATAGGAATCGGTGTCCAGGGTTTGGCCGACGCATTCATC 75045
Query 105263 CT 105264
||
Sbjct 75044 CT 75043
>seq681
Length=269650
Score = 84.2 bits (92), Expect = 3e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 104886 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAG 104945
||||| | || || || |||||||||| || || || |||||||||||||| ||||| |
Sbjct 110415 TGTGGTACGCCATCATCGAGTCTCAAACAGAAACCGGCACACCATACATGCTCTACAAGG 110474
Query 104946 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCT 105005
||||||| ||| ||||| || || |||| |||| ||||| |||||| |
Sbjct 110475 ACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAATCTGT 110534
Query 105006 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 105059
| ||||| || | || | || |||||||||| | ||| | | ||||||
Sbjct 110535 GCACAGAGATTGTAGAGTACACGAGCAAAGATGAGGTGACTGGGGGAGACCTCG 110588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583010493627680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |