Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq854 150 2e-31 seq681 84.2 3e-11 >seq854 Length=240782 Score = 150 bits (166), Expect = 2e-31 Identities = 617/962 (64%), Gaps = 22/962 (2%) Strand=Plus/Minus Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373 ||||| || || | || || ||||| ||||| ||||| || || || ||||||| Sbjct 75993 GTTCACCCATGCCTCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAG 75934 Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433 |||||||| |||||| ||||| ||| ||| | || || |||| || || | | Sbjct 75933 CTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGCATTTATGACACGCTGAAACA 75874 Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATG--TGAGA 104491 ||| |||| ||||| |||| |||||| || || || || | || | || | ||| Sbjct 75873 GTGCGCGCTCATCTCCAAGTCGGCTGGAGGAATCGGTGTGGCCGTCA--GCTGCATCAGA 75816 Query 104492 GCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTT 104551 | | | | || || || ||||| | || |||| || | || ||||| Sbjct 75815 TCTACGGGAAGTTACATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTG 75756 Query 104552 CGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAGGGAT----C 104607 | || | ||| ||| || |||||||| | || | ||| | | ||| | | Sbjct 75755 AGAGTTTACAACAACACCGCACGCTATGTGGACCAGGGTGGAAA-CAAGAGGCCTGGGGC 75697 Query 104608 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCT 104667 | |||| | || || || || ||||| | ||||| | || ||||| |||||| Sbjct 75696 TTTCGCCATGTACCTGGAACCCTGGCATTCCGATATATTTGACTTCCTGGAGTTGAAGAA 75637 Query 104668 CAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 104727 ||| || | |||||| | | | | || || |||| |||| | ||||| || || Sbjct 75636 GAACACTGGAAAAGAGGAGCAGAGAGCCAGAGACCTTTTCTACGCTATGTGGATCCCTGA 75577 Query 104728 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACAA 104784 | |||||| |||| || ||||||| | | |||||||| | ||||||||| | Sbjct 75576 CTTGTTCATGGAGAGGGT---GGAGAGTAACCAGGACTGGTCTCTAATGTGTCCAGACGA 75520 Query 104785 GGCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACG 104843 || || || ||| ||| | ||| ||||||||||| || ||||| || |||| Sbjct 75519 ATGTCCCGGGCTGAACGAGTGCTGGGGG-GAGGAGTTTGAGAAGCTCTACACCAAATACG 75461 Query 104844 AGGAAGAAGGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTC 104902 || ||||||| || | | ||| |||| || | || ||| | || || | Sbjct 75460 AGAAAGAAGGCCGCGTCAA-GCGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATA 75402 Query 104903 AAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAG 104962 |||| || || || || || || ||||||||||| |||||||| ||||| || ||| Sbjct 75401 GAGTCCCAGACTGAAACCGGCACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAG 75342 Query 104963 AGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAA 105022 || || || ||||| |||| |||||||| |||||| || |||||||| ||||| Sbjct 75341 AGCAACCAGCAGAATCTGGGCACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAA 75282 Query 105023 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 105082 | || || || ||| || || ||||| || || || |||| ||| || ||| Sbjct 75281 TACACCAGCAGCGACGAGGTAGCNGTTTGTAATCTGGCCTCCGTCGCACTCAACATGTAC 75222 Query 105083 GTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 105142 || | ||| ||| ||||| | | ||||||| | || || || || Sbjct 75221 GTCACCGCTGAG---CGGACTTTTGACTTTCAAAAACTAGCTGCTGTGACCAAGGTAGTT 75165 Query 105143 ACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA 105202 ||||||| | |||| | || |||| |||| || || || ||| || Sbjct 75164 GTCAAAAACTTGAACAAGATCATAGATATTAATTACTATCCAGTGCCCGAAGCTGAGAAG 75105 Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT 105262 || || | | | ||| | ||||| || ||||||| |||||| | || || | |||||| Sbjct 75104 TCCAACAAGCGCCACAGGCCAATAGGAATCGGTGTCCAGGGTTTGGCCGACGCATTCATC 75045 Query 105263 CT 105264 || Sbjct 75044 CT 75043 >seq681 Length=269650 Score = 84.2 bits (92), Expect = 3e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 104886 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAG 104945 ||||| | || || || |||||||||| || || || |||||||||||||| ||||| | Sbjct 110415 TGTGGTACGCCATCATCGAGTCTCAAACAGAAACCGGCACACCATACATGCTCTACAAGG 110474 Query 104946 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCT 105005 ||||||| ||| ||||| || || |||| |||| ||||| |||||| | Sbjct 110475 ACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAATCTGT 110534 Query 105006 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 105059 | ||||| || | || | || |||||||||| | ||| | | |||||| Sbjct 110535 GCACAGAGATTGTAGAGTACACGAGCAAAGATGAGGTGACTGGGGGAGACCTCG 110588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583010493627680