Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq854 178 1e-39 seq1309 95.1 1e-14 seq767 86.0 7e-12 >seq854 Length=240782 Score = 178 bits (196), Expect = 1e-39 Identities = 458/691 (66%), Gaps = 10/691 (1%) Strand=Plus/Minus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||| || || || ||| | || || || || || || ||||| || || ||| || Sbjct 75998 AAGTGGTTCACCCATGCCTCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACAGCTG 75939 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || |||||||||||| | || |||||||||||| ||||| ||||| || || ||||| Sbjct 75938 TCCAGCTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGCATTTATGACACGCTG 75879 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT---CCACTGCTCGAAC 53443 || |||| || | ||||||||||| | | || || |||||| | | | ||| | Sbjct 75878 AAACAGTGCGCGCTCATCTCCAAGTCGGCTGGAGGAATCGGTGTGGCCGTCAGCTGCA-- 75821 Query 53444 GTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCT 53503 || | | | || | ||| || || || ||| | || |||| | || || Sbjct 75820 -TCAGATCTACGGGAAGTTACATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCCCC 75762 Query 53504 ATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAG 53563 ||||| | || | ||||||||| || || || || |||||||||| ||| | Sbjct 75761 ATGCTGAGAGTTTACAACAACACCGCACGCTATGTGGACCAGGGTGGAAACAAGAGGCCT 75702 Query 53564 GGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTG 53623 ||| | |||||||| ||||| || || ||||| |||| || | || || || ||| || Sbjct 75701 GGGGCTTTCGCCATGTACCTGGAACCCTGGCATTCCGATATATTTGACTTCCTGGAGTTG 75642 Query 53624 CGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGAT 53682 ||| || | || ||| | | | | ||||| || ||| ||| ||||||| Sbjct 75641 AAGAAGAACACTGGAAAAGAGGAGCAGAGAGCCAGAGACCTTTTCTAC-GCTATGTGGAT 75583 Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAA 53742 || ||| | |||||| | | |||||||| || |||| |||| || ||||| || | Sbjct 75582 CCCTGACTTGTTCATGGAGAGGGTGGAGAGTAACCAGGACTGGTCTCTAATGTGTCCAGA 75523 Query 53743 CGAGTGCCCCGGCCTCCAGG-GTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGT 53801 ||| || ||||| || | | ||| || || ||||||||| | || | || | | Sbjct 75522 CGAATGTCCCGGGCTGAACGAGTG-CTGGGGGGAGGAGTTTGAGAAGCTCTACACCAAAT 75464 Query 53802 ACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCC 53861 ||| | |||||| |||| ||| ||||| | |||| ||| |||| ||| Sbjct 75463 ACGAGAAAGAAGGCCGCGTCAAGCGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCA 75404 Query 53862 TCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGA 53921 | || |||| || || || || || |||||| |||||| ||| | ||| || Sbjct 75403 TAGAGTCCCAGACTGAAACCGGCACTCCATACATGCTCTACAAAGATGCCTGCAATAGGA 75344 Query 53922 AGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 ||||||||||| |||| | ||| |||||| Sbjct 75343 AGAGCAACCAGCAGAATCTGGGCACCATCAA 75313 Score = 89.7 bits (98), Expect = 6e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 55493 CTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCG 55552 |||||| | || || ||||| ||||| || || || |||||| |||||||||||||| | Sbjct 74791 CTGCTCTTAGCCCCGATGCCCACCGCCTCAACCGCCCAGATCCTGGGCAACAACGAGTCT 74732 Query 55553 TTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATG 55612 |||| | ||||| | |||||||||| ||| || ||| | || ||||| || Sbjct 74731 ATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTCCTGTCCGGGGAGTTCCAGATT 74672 Query 55613 ATCAACAAGCACCTCGTCAAGGACCTG 55639 ||||| |||||| |||| |||||| Sbjct 74671 GTCAACCCTCACCTCCTCAAAGACCTG 74645 >seq1309 Length=53454 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| |||||||||| ||| |||||||| ||||| ||| | || ||||| || || Sbjct 34873 GTGAAGATGTAACGAGGGCTGGCAGCATCTTTGCCTCCATTGATGCGAGTACCAAACTGA 34814 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || |||| || || ||||| ||||||| ||||||||| || || ||||||||||| Sbjct 34813 CCCAGAGGCTGCAGGATGTTCAAGTTGTTGCTGCCCACAAAATTCTGGGCCAAGTTGACG 34754 Query 117425 ATCGT 117429 || || Sbjct 34753 ATGGT 34749 Score = 86.0 bits (94), Expect = 7e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG- 152087 ||||||||||| || | |||||| ||||| ||||| || | || || |||||||| Sbjct 34873 GTGAAGATGTAACGAGGGCTGGCAGCATCTTTGCCTCCATTGATGCGAGTACCAAACTGA 34814 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 ||||| |||| |||| ||| | ||||||| |||||| |||||||| ||||| || || Sbjct 34813 CCCAGA-GGCTGCAGGATGTTCAAGTTGTTGCTGCCCACAAAATTCTGGGCCAAGTTGAC 34755 Query 152148 AATCGT 152153 || || Sbjct 34754 GATGGT 34749 >seq767 Length=386964 Score = 86.0 bits (94), Expect = 7e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 |||||||||||||| | ||||| | |||||||| || ||||| |||||||||||| Sbjct 60908 GTGAAGATGTATCGAGGACTGGCAGAGTCCTTGCCGCCGTGCAGCCTGGTTCCAAACTGT 60967 Query 152089 -CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 ||||| |||| || | ||| || |||||| |||||||| || || |||||| || Sbjct 60968 CCCAGA-GGCTGCAGCATGTTCAGATTGTTGCTTCCCACGAAGTTTTGGGCCAAACCAAC 61026 Query 152148 AATCGT 152153 ||| || Sbjct 61027 AATGGT 61032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546981162253600