Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq854 183 3e-41
seq81 172 6e-38
seq1349 116 4e-21
seq681 89.7 6e-13
seq1534 86.0 7e-12
seq1309 82.4 9e-11
>seq854
Length=240782
Score = 183 bits (202), Expect = 3e-41
Identities = 658/1013 (65%), Gaps = 36/1013 (4%)
Strand=Plus/Plus
Query 80695 TCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATC 80754
||||||| | | ||| | ||||| |||| |||| ||||| || ||||| | ||
Sbjct 75025 TCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATT 75084
Query 80755 GGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATG 80814
|| | |||||||||||| || ||| || || || | ||| || | ||| |||| |||
Sbjct 75085 GGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATG 75144
Query 80815 ACGCGGTTCAGGTTGCGTGTAACAAC--CCGTG-TAACATCATGAAGTTTCTGAAAGTCG 80871
| ||||| ||| | | ||||| || || | ||| || ||||| ||||||||
Sbjct 75145 ATCTTGTTCAAGTT---TTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCA 75201
Query 80872 AATTGGTTCCCCTTCACAAATGCCGGA-AGGCTCAG------GGACGCCAGATTGCACAC 80924
|| ||| || || || || | | | | || ||| |||||||| || ||
Sbjct 75202 AAAG---TCCGCT-CAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAAC 75257
Query 80925 GGCCACCTCTTCAGCATCTG-TAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAA 80983
|| ||||| || || ||| | | || || ||||| ||||| | ||| ||| |
Sbjct 75258 NGCTACCTCGTC-GCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGA 75316
Query 80984 TTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACG 81043
| || ||||| || | |||||| ||| ||||| || || |||||| |||||| |
Sbjct 75317 TGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATG 75376
Query 81044 GGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCA 81103
| || ||||| || ||| |||| | |||||| | ||||| || | ||||| ||||
Sbjct 75377 GAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCA 75436
Query 81104 C---CTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCA 81159
| |||| | |||||| | | || |||| ||| |||||| || |||| |
Sbjct 75437 CACGCTTGACGCG---GCCTTCTTTCTCGTATTTGGTGTAGAGCTTC-TCAAACTCCTCC 75492
Query 81160 CCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCG 81219
|| || | || | || || |||| || ||||| || |||||| ||
Sbjct 75493 CCCCAGCACTCGTTCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTA 75552
Query 81220 TTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAG 81279
|||| || || |||||| |||||||||||| | ||| ||| ||||| | |
Sbjct 75553 CTCTCCACCCTCTCCATGAACAAGTCAGGGATCCACATAGCGTAGAAAAGGTCTCTGGCT 75612
Query 81280 CGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGC 81339
| | |||||| | || ||| |||||| || ||||| | || || | ||||
Sbjct 75613 CTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGC 75672
Query 81340 CATGGCTCCAGATACACGGCGATCGACCCCTTGCGACGG----CCACCCTGGTTGACGTA 81395
|| || ||||| |||| ||||| | |||| || | |||||||||| || ||
Sbjct 75673 CAGGGTTCCAGGTACATGGCGAAAG-CCCCAGGCCTCTTGTTTCCACCCTGGTCCACATA 75731
Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455
|| || || ||| | || | || ||| |||| | |||| || | || || ||
Sbjct 75732 GCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGT 75791
Query 81456 ACCCACGATACGCGAC--CCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCT 81513
|| |||| | || ||| | | | | ||||| | | |||||| || ||
Sbjct 75792 GCCAGCGAT--GTAACTTCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCA 75849
Query 81514 GACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCT 81573
| | |||| || || | || ||| | |||| || |||||||| ||||||||||| ||
Sbjct 75850 GCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCA 75909
Query 81574 TTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAAC 81633
| |||||| | |||| ||| ||||| |||| ||| || || || | || ||||| ||
Sbjct 75910 TCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAG 75969
Query 81634 AGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTC 81686
||||| |||| || || |||| | | ||||| ||||| ||||||||
Sbjct 75970 AGTGTCGGGGAGGCATGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTC 76022
>seq81
Length=187384
Score = 172 bits (190), Expect = 6e-38
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || || || |||||||| || ||||||||||| ||| | ||
Sbjct 172948 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGT 173007
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| ||||||| || || ||||||||||| || ||||| || || |||
Sbjct 173008 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 173067
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||| ||||| || || |||| || ||||| | ||||| ||
Sbjct 173068 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 173127
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|||| ||||| ||||| || || || ||| |||||||
Sbjct 173128 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCT 173165
Score = 168 bits (186), Expect = 8e-37
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || || || |||||||| || ||||||||||| ||| | |
Sbjct 173632 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 173691
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || ||||||| || || ||||||||||| || ||||| || || |||
Sbjct 173692 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 173751
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||| ||||| || || |||| || ||||| | ||||| ||
Sbjct 173752 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 173811
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
|||| ||||| ||||| || || || ||| ||||||| | ||||| |||
Sbjct 173812 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGTGGTCAA 173862
Score = 163 bits (180), Expect = 3e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || || || |||||||| || ||||||||||| ||| | |
Sbjct 173176 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 173235
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || ||||||| || || ||||||||||| || ||||| || || |||
Sbjct 173236 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 173295
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||| ||||| || || |||| || ||||| | ||||| ||
Sbjct 173296 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 173355
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|||| ||||| ||||| || || || ||| |||||||
Sbjct 173356 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCT 173393
Score = 163 bits (180), Expect = 3e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || || || |||||||| || ||||||||||| ||| | |
Sbjct 173404 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 173463
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || ||||||| || || ||||||||||| || ||||| || || |||
Sbjct 173464 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 173523
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||| ||||| || || |||| || ||||| | ||||| ||
Sbjct 173524 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 173583
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|||| ||||| ||||| || || || ||| |||||||
Sbjct 173584 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCT 173621
>seq1349
Length=1030505
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || || | |||||| || | ||| | || || | |
Sbjct 331457 ATGCAGATATTTGTGAAGACCCTGACTGACAAGACCATCAGTCTGCATGTGGAACCCAAT 331398
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| ||||||| ||| | |||| || || || || |||||||| || ||||| || |||
Sbjct 331397 GACAGCATTGTGAATATCAAGGTCAAGATCCATGATAAGGAGGGGATCCCTCCTGATCAG 331338
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||| ||||| || |||| | | ||||| | ||||| ||
Sbjct 331337 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGCAGGACGGCCACACCCTCTCTGACTACAAC 331278
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| | ||| || || || || | ||| | ||||||
Sbjct 331277 ATCCAGAAGGAGTTCACCCTCCACCTTGTGCTCCGTTTGTCCGGTGG 331231
Score = 107 bits (118), Expect = 2e-18
Identities = 118/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || || |||||||| || | ||| | || || | |
Sbjct 331685 ATGCAGATATTTGTGAAGACCCTGACTGGCAAGACCATCAGTCTGAATGTGGAACCCAAT 331626
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| ||||||| ||| | |||| || || || || |||||||| || ||||| || |||
Sbjct 331625 GACAGCATTGTGAATATCAAGGTCAAGATCCATGATAAGGAGGGGATCCCTCCTGATCAG 331566
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
||| |||| || | |||||||||||| || |||||||
Sbjct 331565 CAGTGTCTGATCTATGCTGGTAAGCAGCTTGAGGATG 331529
Score = 104 bits (114), Expect = 3e-17
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC-AGGTGATAGCAT 27473
||||| | ||| | || |||||||| || ||||| ||| |||| | | ||| ||| |
Sbjct 331904 TTTGTGAGGACCCAGACTGGCAAGACCATCACTCT-GAGAGTGAGACCAAATGACAGCGT 331846
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
|| ||| | || | | || ||| |||||||| || ||||| ||||||||| ||||
Sbjct 331845 TGAGAATGTCAAATCCATGATCTGGGATAAGGAGGGGATCCCTCCTGACCAGCAGTGTCT 331786
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| | |||||||||||| || ||||| | | |||| | ||||| || |||| ||
Sbjct 331785 GATCTATGCTGGTAAGCAGCTTGAGGACGGGTGCTCCCTCTCTGACTACAACATCCAGAA 331726
Query 27594 GGAATCCACTCTTCATCTAGT 27614
||||||||| || || || ||
Sbjct 331725 GGAATCCACCCTCCACCTTGT 331705
Score = 104 bits (114), Expect = 3e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | |||||||| || || | ||||| || || |
Sbjct 332133 ATGCAGATCTTTGTGAAGACCTACATTGGCAAGACCATCACCGTGGAGGTGGAACCAAAT 332074
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| ||||||| ||| | ||||| || || || ||||||||||| ||||| || |
Sbjct 332073 GACAGCATTGAGAATGTCAAGGCCAAGATCTGCGATAAGGAGGGAATCCCTCCTTTCCTG 332014
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||| |||||| || ||||||| | | ||| | ||| ||
Sbjct 332013 CAGCGTCTGATCTTTGCTACTAAGCAGCTGGAGGATGGAGGCAACCTCTCCACCTACAAC 331954
Query 27586 GTCCAAAAGGAATCCAC 27602
|||| ||||| |||||
Sbjct 331953 ATCCAGAAGGAGTCCAC 331937
>seq681
Length=269650
Score = 89.7 bits (98), Expect = 6e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007
|||| || || || ||||||| ||| || || || || |||||||| | ||||||
Sbjct 110552 ACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTGC 110493
Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067
||| |||||| |||||||||||| |||||| || || ||||| || || ||||
Sbjct 110492 TCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTCTGTTTGAGACT 110433
Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCAC 81104
|| |||||||| ||| | || | ||||| |||||
Sbjct 110432 CGATGATGGCGTACCACAGCTGCTGGGCCTTCACCAC 110396
>seq1534
Length=15379
Score = 86.0 bits (94), Expect = 7e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 64725 AGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCT 64784
||| ||||| ||||| || |||||||| |||||||| || ||| || ||||||||
Sbjct 8788 AGCCTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGGTCCTTTGCTTCCATCTTCTGGCT 8729
Query 64785 AAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGA 64844
|| || ||||||||||||| || ||| | || || |||||||| ||| | |||||
Sbjct 8728 GAAGAAAAGGGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGA 8669
Query 64845 GG 64846
||
Sbjct 8668 GG 8667
>seq1309
Length=53454
Score = 82.4 bits (90), Expect = 9e-11
Identities = 96/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184
||||| |||||| | || ||||| ||||| || || ||| ||||| | || ||||
Sbjct 34749 ACCATCGTCAACTTGGCCCAGAATTTTGTGGGCAGCAACAACTTGAACATCCTGCAGCC- 34807
Query 32185 TCTGGA-CAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACAT 32243
||||| |||||||| || || || || ||||| |||||||| ||| | ||||||||
Sbjct 34808 TCTGGGTCAGTTTGGTACTCGCATCAATGGAGGCAAAGATGCTGCCAGCCCTCGTTACAT 34867
Query 32244 CTTCACC 32250
|||||||
Sbjct 34868 CTTCACC 34874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570065651291840
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