Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq186 235 7e-57 >seq186 Length=681005 Score = 235 bits (260), Expect = 7e-57 Identities = 546/808 (68%), Gaps = 18/808 (2%) Strand=Plus/Minus Query 13622 GACGGCCGACTGCGTGGCCTTCGT-GAAAGACAGGGGGT--ATCTCGTGAGGCCCCTGAG 13678 |||||| ||||||| | | | | |||||| ||||||| ||| || || || ||||| Sbjct 385584 GACGGCGGACTGCGCTTCTTACATTGAAAGA-AGGGGGTTCATCACG-GAN-CCTCTGAG 385528 Query 13679 CCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGAT 13738 | ||| ||| | || |||||||| ||||| || |||||||| |||| |||||||| Sbjct 385527 CGAGGAGGAGAGAAACTTCCCCATCGCTTACTCCATGGTGATCCATGACAACATCGAGAT 385468 Query 13739 GTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGA 13798 ||||||||| |||||| ||||||||||| |||| |||||| ||||||||||||| ||||| Sbjct 385467 GTTCGAGCGGCTCCTGCGGGCCATCTACACCCCTCAGAACGTCTACTGCGTCCATGTGGA 385408 Query 13799 CTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAA 13858 || ||| || || |||| || |||| || || ||| ||||||| Sbjct 385407 TCAGAAATCCAAGGATGAATTCAAGGCGGCCGTCGTGGGGATTATTTCCTGCCTCCCTAA 385348 Query 13859 CGTGGCCCTGGCCCACCGGCT--GCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAG 13916 |||| ||||| ||||| | | | | ||||||||||| || ||| ||||| ||| Sbjct 385347 CGTGTTCCTGG-CCACCAAATTAGAAAG-CGTGGTGTACGCGTCGTGGTCCCGCGTACAG 385290 Query 13917 GCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTC 13976 || ||| | | ||||||| || ||| | |||| || || |||| |||| |||| Sbjct 385289 GCGGACTTGAACTGCATGAGAGATCTGCTGGACTCCAAGGTTAAATGGAAGTACATGCTG 385230 Query 13977 AACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAG 14036 ||| |||||| |||||||| |||| |||||| |||||| |||| |||||||||| Sbjct 385229 AACACATGCGGGGCCGACTTCCCCATCAAAACCAACAGGGAGATGGTGCAGGCGCTGAAG 385170 Query 14037 GCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAGCTGCACCGC 14096 ||||| |||| |||| | ||||| |||| || ||||| | || | || Sbjct 385169 ACCCTGAAGGGCATGAACAGCATGGAGTCCGAGACCA---CCAACGAGAACAAAAAGGGC 385113 Query 14097 ATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGC-AGGAACAA 14155 || | ||| || || || | | |||| ||| || | | ||| || Sbjct 385112 CGGTGGCTGTACCACCACCAGGTCA-CG--GATGAGGTGATCAGAACAGACGTGGAGAAA 385056 Query 14156 GGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCACCCG 14215 ||||| ||||| | | | ||||| || | |||| || ||| | | ||| | | Sbjct 385055 AGCCCC-CCGCCCATAAAAACGCCCATGTTCTCCGGAANTGCCTACATCGTGGTGTCGAG 384997 Query 14216 GGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCACTGGTTCGA 14275 |||||| | ||| | | |||| |||| |||| || | ||| | Sbjct 384996 AACTTTCGTGCAACACGTGATGACAGACGCAAAGGTGCAGGAGCTCCTGGAGTGGGAGAA 384937 Query 14276 GGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCC 14335 |||||| ||||| || ||||||||||||||||||||| ||||||| ||| | || Sbjct 384936 GGACACCTACAGTCCGGACGAGCACCTGTGGGCCACCCTGCAGAGGATGCCCACAGTCCC 384877 Query 14336 CGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGTT 14395 |||| | ||| || |||||||||||| ||||||||| |||| || | | Sbjct 384876 CGGGTCATTGCCCCACAACAGCAAGTACGACACGTCGGACATGCTGGCCCTGGCGCGCGT 384817 Query 14396 CGTCAAGTGGCACTACTACGAGGGGGAT 14423 ||||||||| ||||| | ||| ||| Sbjct 384816 GGTCAAGTGGAGCTACTTGGCGGGTGAT 384789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658456502072320