Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq746 102 7e-17 >seq746 Length=686128 Score = 102 bits (112), Expect = 7e-17 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || |||||||| ||||||||||||||||| || ||||||| || |||||||| Sbjct 480732 TACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATCTCCCTCCTCT 480791 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 || | || |||| | ||||||||||| | | ||| |||| || ||||| ||||| Sbjct 480792 CGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTCCCAAATCTTT 480851 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052 || || |||||||| |||| || |||| Sbjct 480852 ACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGG 480885 Score = 102 bits (112), Expect = 7e-17 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352 |||| || |||| |||||||| || || ||||| ||||| || |||| ||| Sbjct 480885 CCACAAATGCCAAAGAGCTCTCAGAGAAAGGAGTAAAGATTTGGGAAGCCAACGGTTCTA 480826 Query 34353 GAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCT 34412 | | ||||||||||| | |||| || | || |||||||| || ||||||| || | Sbjct 480825 GGGCTTTTCTGGACAATCTGGGGCTCACCGACCGAGAGGAGGGAGATCTGGGCCCTGTGT 480766 Query 34413 ACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 |||||||||||||||| |||||||| || ||||| Sbjct 480765 ACGGGTTCCAGTGGAGGCACTTTGGTGCCGAGTA 480732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448070028191040