Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq81 181 2e-40
seq1349 113 1e-19
seq559 98.7 2e-15
seq1204 86.0 1e-11
>seq81
Length=187384
Score = 181 bits (200), Expect = 2e-40
Identities = 169/215 (79%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 173159 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 173100
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || ||||| |||| ||||||||||||
Sbjct 173099 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 173040
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || || ||||||||| | || ||||| |||||||| |||
Sbjct 173039 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTC 172980
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || || |||||||| | |||||| ||
Sbjct 172979 TTGCCAGTCAGGGTTTTTACAAAGATCTGCATGTT 172945
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 173387 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 173328
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || ||||| |||| ||||||||||||
Sbjct 173327 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 173268
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| || |||||||| | || ||||| |||||||| |||
Sbjct 173267 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTC 173208
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || |||||||| | ||||||
Sbjct 173207 TTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173176
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 173615 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 173556
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || ||||| |||| ||||||||||||
Sbjct 173555 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 173496
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| || |||||||| | || ||||| |||||||| |||
Sbjct 173495 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTC 173436
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || |||||||| | ||||||
Sbjct 173435 TTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173404
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 173843 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 173784
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || ||||| |||| ||||||||||||
Sbjct 173783 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 173724
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| || |||||||| | || ||||| |||||||| |||
Sbjct 173723 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTC 173664
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || |||||||| | ||||||
Sbjct 173663 TTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173632
>seq1349
Length=1030505
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || ||| |||| || |||||||| || || | ||||| || ||
Sbjct 331246 AGCACAAGGTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCC 331305
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
| |||||||||||| || ||||| || || || || |||||||| | || ||||| ||
Sbjct 331306 TGCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCA 331365
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || | || | ||| ||||| | ||| || | ||| |||| |||
Sbjct 331366 TGGATCTTGACCTTGATATTCACAATGCTGTCATTGGGTTCCACATGCAGACTGATGGTC 331425
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| | || || ||||| ||||| | ||||||
Sbjct 331426 TTGTCAGTCAGGGTCTTCACAAATATCTGCAT 331457
Score = 91.5 bits (100), Expect = 3e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || ||||| || || |||||||| || || | |||| | || ||
Sbjct 331702 AGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGAGCACCCGTCC 331761
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || |||| || | || ||||||||||| | || ||||| |||
Sbjct 331762 TCAAGCTGCTTACCAGCATAGATCAGACACTGCTGGTCAGGAGGGATCCCCTCCTTATCC 331821
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCA-GAGCTTTCAACCTCGAGAGTGATCGT 211081
|||| | ||| || || || | | ||||| | | ||| ||| |||||||| ||
Sbjct 331822 CAGATCATGGATTTGACATTCTCAACGCTGTCATTTGGTCTCACTCTC-AGAGTGATGGT 331880
Query 211082 CTTTCCCGTGAGAGTCTTTACAAA 211105
||| || || | ||| | |||||
Sbjct 331881 CTTGCCAGTCTGGGTCCTCACAAA 331904
Score = 89.7 bits (98), Expect = 1e-12
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210908 AAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAG 210967
|||||| | |||||||| || |||||||| || | ||| | | |||||| |||||
Sbjct 331927 AAGGTGGATGGTGGACTCCTTCTGGATGTTGTAGGTGGAGAGGTTGCCTCCATCCTCCAG 331986
Query 210968 CTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGAT 211027
|||||| || ||||| || || || || |||||| | ||| ||||| || |||
Sbjct 331987 CTGCTTAGTAGCAAAGATCAGACGCTGCAGGAAAGGAGGGATTCCCTCCTTATCGCAGAT 332046
Query 211028 CTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087
||| || || || || ||| ||||| ||| ||||| | ||||| ||||| ||
Sbjct 332047 CTTGGCCTTGACATTCTCAATGCTGTCATTTGGTTCCACCTCCACGGTGATGGTCTTGCC 332106
Query 211088 CGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| | ||||||
Sbjct 332107 AATGTAGGTCTTCACAAAGATCTGCAT 332133
>seq559
Length=398206
Score = 98.7 bits (108), Expect = 2e-15
Identities = 142/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 139822 GGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAAC 139881
|| ||||||||||| ||||| |||||||||| |||| ||| ||| ||||| ||||||
Sbjct 324208 GGCAGAGGAGGACAGTCTGCCCTGCGTTTTGCTCGACTGAGAATGGAGAAGAGACACAAC 324267
Query 139882 TACTTGAGAAAAGTTGCAGAGAACGCAATACAG-TGTTT-TAT-CAAAGACAACAAGTGT 139938
|| |||| ||||| || |||| || | ||| ||||| | | ||| || | |||| |
Sbjct 324268 TATGTGAGGAAAGTGGCTGAGACGGCTGTCCAGCTGTTTGTGTCCAACGATA--AAGT-T 324324
Query 139939 TTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTCCTGGAATCT 139998
||| | || || || ||||| ||||| || || |||||||| ||||| | |||
Sbjct 324325 AATGTGGCCGGAATGGTCTTGGCTGGTTCTGCCGACTTCAAGACCGAGCTCAGCCAGTCT 324384
Query 139999 GACTTTTTTGACCC 140012
||| | ||||| ||
Sbjct 324385 GACATGTTTGATCC 324398
>seq1204
Length=196151
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||| |||||||||||| || || |||||||| ||||| | || ||||||
Sbjct 162795 CCTTCCTTATCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCGCTGGGCTCCACCTCG 162854
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| ||||||||||| | ||||| || || | |||||| ||
Sbjct 162855 AGGGTGATGGTCTTTCCCGTCAACGTCTTCACGAAGATCTGCATGTT 162901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158642113667180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |