Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq746 152 4e-32 >seq746 Length=686128 Score = 152 bits (168), Expect = 4e-32 Identities = 143/181 (79%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||| ||||||||| || || || |||||||| |||||||||||||| || ||||| || Sbjct 480722 CATGTTCGTGTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATC 480781 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 |||||| || | || || ||| ||||||| ||| | || ||||||||||| || Sbjct 480782 TCCCTCCTCTCGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTC 480841 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 27668 ||| |||||||| || ||||| ||||||||||||| |||||||| || ||| || | || Sbjct 480842 CCAAATCTTTACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCC-CTGCCGCAACA 480900 Query 27669 C 27669 | Sbjct 480901 C 480901 Score = 140 bits (154), Expect = 2e-28 Identities = 128/162 (79%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| || || |||||||| || || || | |||||||||||||| ||||| Sbjct 480276 AGGCCTGTGATATGTGCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAAGGGC 480335 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 |||||||| ||||| |||||||| | |||||| ||||| ||||| ||||| || || | Sbjct 480336 ACCCCGAGGCCCATATCCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCACAC 480395 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATG 27369 ||||| ||||| || | |||||||| || || ||||||||| Sbjct 480396 ACGTAGAACTGGCACAGAGCGTGGCAGGGTGGCAGAGCCATG 480437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369352590335492