Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq854 464 9e-126 seq681 104 3e-17 >seq854 Length=240782 Score = 464 bits (514), Expect = 9e-126 Identities = 1281/1965 (65%), Gaps = 32/1965 (2%) Strand=Plus/Plus Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118 |||| || || || || |||||||| |||||| || | || | ||||| ||||| | Sbjct 74608 TATTTTTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGT 74667 Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178 | || || || || || || |||| || || || ||||| || || ||||| || | || Sbjct 74668 TGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTT 74727 Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238 | | ||| || ||||| |||| || || || || || || || ||||| || || | | Sbjct 74728 CGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGA 74787 Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298 | ||| || || | || || | |||||| || ||||| ||||| ||| | | Sbjct 74788 GCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCAACA 74847 Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358 | || | || ||||| | ||||| || || || || || || | || | Sbjct 74848 GGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGGAGC 74907 Query 77359 CATTATATGTTTCATAAGGTCC----TTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 | | || ||||| || || || | Sbjct 74908 CTTCGTAGGTTTCGTACGGCCCGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGG 74967 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 ||| |||| || || || ||||| |||| | || ||| || ||||| || || Sbjct 74968 GCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCG 75027 Query 77475 AACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGT 77534 ||||| ||| | | || || || || || || || ||||| || || || || || || Sbjct 75028 AACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGC 75087 Query 77535 CTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATT 77594 || || | ||| ||||| | | |||||| || | ||||| |||||||| ||||| || Sbjct 75088 CTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATC 75147 Query 77595 TTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT 77654 || || | ||| | |||||||| || ||| | |||||| |||| ||||| | Sbjct 75148 TTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTC 75207 Query 77655 C---CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCA 77711 | || | | || ||||||| | || | || || ||||||||||| |||||||| Sbjct 75208 CGCTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTCG 75267 Query 77712 TTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771 | | ||| |||| | || || || |||||||| || | ||||| ||||||||| Sbjct 75268 TCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGA 75327 Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 || || ||||||||||| ||||||| | || || || || || | ||||| |||||| Sbjct 75328 TTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTT 75387 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGT 77889 ||| |||| || || || || | | ||| || || || || || | || | ||| Sbjct 75388 TCAGTCTGGGACTCTATGATGGCATGCCAAAC--CTGCTGGGCCTTCACCACACGCTTGA 75445 Query 77890 ATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCAT 77949 || | ||| | || |||| || || ||| ||||| || || ||||| || | Sbjct 75446 CGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGT 75505 Query 77950 CCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTT 78009 || || || ||||| | ||| ||||| | |||||||| | || || | | Sbjct 75506 TCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCT 75565 Query 78010 TCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCAT 78069 ||| || | ||||| ||||| | ||| || || |||| || ||| || || || | Sbjct 75566 CCATGAACAAGTCAGGGATCCACATAGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTT 75625 Query 78070 TTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 78129 |||| || ||||| || | || || || || | ||||| |||||||| ||||| || | Sbjct 75626 TTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGT 75685 Query 78130 ATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189 | || || | | | ||||| | || || || ||||| || | ||| | |||||||| | Sbjct 75686 ACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGT 75745 Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAAC 78249 | |||||||||| ||| || | || || || || | ||||| || |||| || |||| Sbjct 75746 TGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAAC 75805 Query 78250 TTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTA 78309 |||| | | | || || | || | || |||||||| ||| ||| || || | Sbjct 75806 TTCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGA 75865 Query 78310 GAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAA 78369 | ||||| |||||| || || || || ||||| || ||||||||| ||||| || | Sbjct 75866 GCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCA 75925 Query 78370 GAAAACAGCTAGACATTTG----ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGAT 78425 | || ||||| |||| || || || || ||||||||||| | |||||| || Sbjct 75926 GGAAGCAGCTGGACAGCTGTGGCCTGTTG----GTACCTGCATTAAAGAGTGTCGGGGAG 75981 Query 78426 GCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC 78485 ||||| || ||||| || || || || || ||||| |||||||| |||| || || || Sbjct 75982 GCATGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCT 76041 Query 78486 CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTA 78545 |||||| || || || | || | ||| | ||| ||||| |||| || || || Sbjct 76042 GTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTG 76101 Query 78546 TTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 78605 || || ||||||| ||| || |||| |||||||| || || | ||||| ||| Sbjct 76102 CCGTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTACGAA 76161 Query 78606 AAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCC 78665 || || | || || || || | || || || ||||||| | | || || | | Sbjct 76162 AAATCGCGGTCATATATTATGGCCGAGTTCAGGCGGTCTTTGTTCTGGAGGACGATGT-C 76220 Query 78666 ATGACAGTAGTT-GAAATAATAGGAGATCGTACAC-CATTTTTAGGATTAACATAGTTAA 78723 | | | || || | || ||||| | || | |||| || || | ||||| Sbjct 76221 AAGCGTCTCCTTGGAGACCATGGGAGAGTG-ACGCTTATTTAGTGGGTTTATGTAGTTGT 76279 Query 78724 ATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAG 78783 | | || ||||| || ||||| || | || ||||| |||||||| || || || || | Sbjct 76280 ACAGGTCCTCCATCACGTCACTGAACACCTTCTTTGTCTCCTTGTGCAGGTTTGAGACGG 76339 Query 78784 CTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTT 78843 | || | |||||| || || || || ||||| |||| || || ||| || | | Sbjct 76340 CGATCCGTGCAGCGAGGATGGCGTAGTCAGGGTGTTTGGTGGTCAGAGTAGCAGAGA--- 76396 Query 78844 CTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTT 78903 | || | || | ||| | || ||||| ||||| || | || || || || | Sbjct 76397 ------CCAAGGTGTCGAGCTCCACNGTGGTGACTCCATTGTACAAACCCTGGATCACCT 76450 Query 78904 TCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAA 78963 |||||| || | | | || || ||||| |||| ||| | || || || | || | Sbjct 76451 TCATGGTAATCTGGGCTGGGTCCACAAAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGGA 76510 Query 78964 TACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 | ||||| ||||||||||| || || || ||||| || ||||| Sbjct 76511 TGCGAGAGGTGATTTTATCGAACATGACGCGCTCCTGGCGTCCAT 76555 >seq681 Length=269650 Score = 104 bits (114), Expect = 3e-17 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 78715 CATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGAT 78774 || || || ||||| | | |||| ||||||| | ||| || || || |||||||||| Sbjct 108829 CACAGCTATATAAAGCCTGTCTTAC--CACTAAAGACTTTCTTGGTCTCTTTGTGTAGAT 108772 Query 78775 TAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGG 78834 | || || || || | |||||| || || ||||||||||||| || || || ||||| Sbjct 108771 TGGACACGGCGATCCGTGCAGCCAGGATGGCATAATCAGGATATTTGGTGGTGAGAGTGG 108712 Query 78835 CTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTT 78894 |||| | ||||| || | | | || | ||| | || ||||| ||| | || || || | Sbjct 108711 CTGCCGTCTCTGCTGCCAGAGTGTCCAGCTCCACTGTGGTGACTCCACTGTACAGGCCCT 108652 Query 78895 GAATAACTTTCATGGCGAT 78913 | || || ||||||| ||| Sbjct 108651 GGATCACCTTCATGGTGAT 108633 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||||||||| || || ||||| | ||| | || ||||||| || || || Sbjct 110135 ACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTGC 110076 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 || || || || || |||||||| || || || ||| | | | ||| |||||||| || Sbjct 110075 TCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGGC 110016 Query 78123 TCTAGATATATTGCCATAACTCCAGGTC 78150 || || || | || | ||||||||| Sbjct 110015 TCCAGGTACACAGCAAAGGCTCCAGGTC 109988 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 ||||| || || ||||| || ||||||| |||||||| || || ||||||||||| | Sbjct 110544 ATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTG 110485 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAAT 77851 ||||| | |||||| || || || | || || |||||||| | || || ||||| || Sbjct 110484 TTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTCTGTTTGAGACTCGATGAT 110426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694370682884480