Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq854 457 1e-123 seq681 87.8 3e-12 >seq854 Length=240782 Score = 457 bits (506), Expect = 1e-123 Identities = 1302/1999 (65%), Gaps = 44/1999 (2%) Strand=Plus/Plus Query 75626 TGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTC 75685 |||||||||||| | || || | |||| || || || || |||||||| ||| Sbjct 74580 TGAATGGATCCGTTGTGAGCGATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCCCTC 74639 Query 75686 TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTT 75745 || || | || | ||||| ||||| || ||||| || || || || |||| || || Sbjct 74640 TCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTG 74699 Query 75746 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCA 75805 || ||||| || || ||||| || | ||| | ||| || ||||| |||| || || || Sbjct 74700 CGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCG 74759 Query 75806 GTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATT 75865 ||||| || || ||||| || || | | | ||| || || | || || | |||| Sbjct 74760 GTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATT 74819 Query 75866 TTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTAT 75925 || || ||||| ||||| ||| | || || | || ||||| | ||||| Sbjct 74820 TTTTCCTTTAGCAGCTTCCAGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTAC 74879 Query 75926 TGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCA 75985 || || || || ||||| | || || | || |||||||| | |||| | Sbjct 74880 TGAAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTACGGCCCGAGCNNNNNN 74939 Query 75986 GCTAGTTCGCAACTCGCCTCT----AACGCACCGTAATAAATTGTTTCGAAAATCTTCTT 76041 | || |||| || || || ||||| |||| | Sbjct 74940 NNNNNNNNNNNNNNNNNNNNNNNNGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGT 74999 Query 76042 ATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGC 76101 || ||| || ||||| | || || || || ||| | | || || ||||| || || Sbjct 75000 GTTCAGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGC 75059 Query 76102 TAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGG 76161 | ||||| || || || || || || || || | ||| ||||| | |||||||| || Sbjct 75060 CAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGG 75119 Query 76162 AATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCAC 76221 | || || |||||||||||||| || || || | ||| |||||||||| || ||| Sbjct 75120 CACTGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCAC 75179 Query 76222 GTCCTTTAGTTTGAGAAAATCAAATTTTC---CATCTATCACAAACATATTAAGAGCTAT 76278 | |||||| |||| ||||| | | || | | || |||| || || || | Sbjct 75180 AGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACATGTTGAGTGCGAC 75239 Query 76279 AGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCA 76338 || || ||||||||||| |||||||| | ||| |||| | || || ||||| Sbjct 75240 GGAGGCCAGATTACAAACNGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCA 75299 Query 76339 TAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTC 76398 |||||| || | |||||| || || ||||| || ||||||||||| | || || | || Sbjct 75300 TAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATC 75359 Query 76399 CTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 76458 || || || | | ||||| || |||||| |||| || || || || | | ||| || Sbjct 75360 TTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAAC 75419 Query 76459 GACT-CT-AGCTTTTATTATAGATTTGTATCG--CTTCTCTCTTTCATATTGTGTATATA 76514 || || || || | | | ||| || ||||| || || |||| || || | Sbjct 75420 --CTGCTGGGCCTTCACCACACGCTTGACGCGGCCTTCTTTC--TCGTATTTGGTGTAGA 75475 Query 76515 ACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCA 76574 | ||||| || || ||||| || | || || |||||||| | |||||||| | Sbjct 75476 GCTTCTCAAACTCCTCCCCCCAGCACTCGTTCAGCCCGGGACATTCGTCTGGACACATTA 75535 Query 76575 ATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAA 76634 ||||| || | || |||| | ||| || | ||||| ||||| | ||| Sbjct 75536 GAGACCAGTCCTGGTTACTCTCCACCCTCTCCATGAACAAGTCAGGGATCCACATAGCGT 75595 Query 76635 TAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACT 76694 || || |||| || ||| | || || ||||| || ||||| || | || ||||| | Sbjct 75596 AGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGT 75655 Query 76695 CCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTAC 76754 | | ||||| |||||||| ||||| || || || || | | | || || | || || | Sbjct 75656 CAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTTC 75715 Query 76755 CTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGT 76814 | ||||| || | ||| | || ||||| || |||||||||| ||| || | || || | Sbjct 75716 CACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCAT 75775 Query 76815 TAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATA 76874 | || | ||||| || |||| || |||||||| | | || || | | | Sbjct 75776 TGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGATCTGATGCAGCTGACGGCCA 75835 Query 76875 GGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGC 76934 || |||||||| ||| || ||||| || || || |||||| |||||||| |||| Sbjct 75836 CACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGC 75895 Query 76935 CCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG----ATGATGA 76990 |||| || || |||||| ||||| || || || ||||| |||| || || || Sbjct 75896 CCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTG- 75954 Query 76991 ACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGA 77050 || ||||||||||| | ||| || || ||||| |||||||| || || || || || Sbjct 75955 ---GTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCACTTCTCTGACAGCAGG 76011 Query 77051 TTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATC 77110 ||||| |||||||| |||| || ||||| |||||| || || |||| || | ||| Sbjct 76012 TTGTAGGTTTCAATCGCTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATG 76071 Query 77111 AACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCC 77170 | ||| ||||| ||||| || | || || || ||||||| ||| || ||| Sbjct 76072 AGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCC 76131 Query 77171 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTT 77230 | |||||||| || || | ||||| ||||| || | || || || || |||| || Sbjct 76132 AGGGTTTTAAAGCCGAAGAAATTGTACGAAAAATCGCGGTCATATATTATGGCCGAGTTC 76191 Query 77231 AGTTTGTCCTTATATTTGGTAACAATATC---CATGACAGTGGTAGAAATAATTGGAGAT 77287 || ||| || | | | || || || | | | || || | || ||||| Sbjct 76192 AGGCGGTCTTTGTTCTGGAGGACGATGTCAAGCGTCTCCTTG---GAGACCATGGGAGA- 76247 Query 77288 CGTATTCCATTTTTA--GGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATA 77345 || | | |||| || || | ||||| | | ||| ||||| ||||| || || | Sbjct 76248 -GTGACGCTTATTTAGTGGGTTTATGTAGTTGTACAGGTCCTCCATCACGTCACTGAACA 76306 Query 77346 GtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGT 77405 || ||||| |||||||| || || || ||||| || | ||||| || || || |||| Sbjct 76307 CCTTCTTTGTCTCCTTGTGCAGGTTTGAGACGGCGATCCGTGCAGCGAGGATGGCGTAGT 76366 Query 77406 CAGGATGTTGTGTAGTGCAG-GTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATA 77464 |||| |||| || || ||| || || | | | || || || | || | Sbjct 76367 CAGGGTGTTTGGTGGT-CAGAGTAGCAGAGA---------CCAAGGTGTCGAGCTCCACN 76416 Query 77465 GTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCTATTTTGATAGGATCTACA 77524 || || ||||| || || | || || || || ||||||| || | | || || ||| Sbjct 76417 GTGGTGACTCCATTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCTGGGTCCACA 76476 Query 77525 AACTCGGTGTTCAAACCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATG 77584 || || | ||| | || || || | || || ||||| ||||||||||| |||||| Sbjct 76477 AAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGGATGCGAGAGGTGATTTTATCGAACATG 76536 Query 77585 ACATTCTCCTTACATCCAT 77603 || ||||| | ||||| Sbjct 76537 ACGCGCTCCTGGCGTCCAT 76555 >seq681 Length=269650 Score = 87.8 bits (96), Expect = 3e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 ||||| | ||| || || || ||||||||||| || ||||| || | ||||| || || Sbjct 108802 CTAAAGACTTTCTTGGTCTCTTTGTGTAGATTGGACACGGCGATCCGTGCAGCCAGGATG 108743 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||| ||||||| || || ||| |||||||| | ||||| || | ||| || | Sbjct 108742 GCATAATCAGGATATTTGGTGGTGAGAGTGGCTGCCGTCTCTGCTGCCAGAGTGTCCAGC 108683 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | || || ||||| | || || || || || || ||||||| Sbjct 108682 TCCACTGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCATGG 108637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712628444202240