Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq81 111 4e-19 >seq81 Length=187384 Score = 111 bits (122), Expect = 4e-19 Identities = 156/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || ||||||||||| |||| | || | |||||| Sbjct 173159 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 173100 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| || Sbjct 173099 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 173040 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | |||| ||| ||| || |||||||| || Sbjct 173039 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCCACCTCAAGAGTGATG 172983 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || || || || |||| |||||| || Sbjct 172982 GTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATGTT 172945 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || ||||||||||| |||| | || | |||||| Sbjct 173387 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 173328 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| || Sbjct 173327 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 173268 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || |||| | | |||| ||| || |||||||| || || Sbjct 173267 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTC 173208 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || |||| |||||| Sbjct 173207 TTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173176 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || ||||||||||| |||| | || | |||||| Sbjct 173615 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 173556 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| || Sbjct 173555 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 173496 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || |||| | | |||| ||| || |||||||| || || Sbjct 173495 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTC 173436 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || |||| |||||| Sbjct 173435 TTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173404 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || ||||||||||| |||| | || | |||||| Sbjct 173843 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 173784 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| || Sbjct 173783 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 173724 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || |||| | | |||| ||| || |||||||| || || Sbjct 173723 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTC 173664 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || |||| |||||| Sbjct 173663 TTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153313258748772