Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq81 147 2e-30
seq1349 107 1e-18
>seq81
Length=187384
Score = 147 bits (162), Expect = 2e-30
Identities = 174/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| ||||| ||||| | || || ||||| || ||| |||||| ||||||||||| ||
Sbjct 173406 CATGCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 173347
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| | || ||||||||||| || |||||||||| | ||||||||| |
Sbjct 173346 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG 173287
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| |||| | |||| | ||||||||| || |
Sbjct 173286 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGCTGGGCT 173228
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| | || || ||||| || || ||||| || || ||||| ||||||
Sbjct 173227 CCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173175
Score = 147 bits (162), Expect = 2e-30
Identities = 174/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| ||||| ||||| | || || ||||| || ||| |||||| ||||||||||| ||
Sbjct 173634 CATGCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 173575
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| | || ||||||||||| || |||||||||| | ||||||||| |
Sbjct 173574 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG 173515
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| |||| | |||| | ||||||||| || |
Sbjct 173514 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGCTGGGCT 173456
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| | || || ||||| || || ||||| || || ||||| ||||||
Sbjct 173455 CCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173403
Score = 140 bits (154), Expect = 2e-28
Identities = 170/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| ||||| ||||| | || || ||||| || ||| |||||| ||||||||||| ||
Sbjct 173178 CATGCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 173119
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| | || ||||||||||| || |||||||||| | ||||||||| |
Sbjct 173118 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG 173059
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||||| | | |||||||| || ||
Sbjct 173058 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTC 172999
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||| | || || ||||| || || ||||| || || ||||| ||||||
Sbjct 172998 CACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 172947
Score = 140 bits (154), Expect = 2e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | || || ||||| || ||| |||||| ||||||||||| |||| |
Sbjct 173858 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173799
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || |||||||||| | ||||||||| | ||
Sbjct 173798 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173739
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289
| |||||||| ||| ||||| |||| | |||| | ||||||||| || |||||
Sbjct 173738 ATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGCTGGGCTCCAC 173680
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||| | || || ||||| || || ||||| || || ||||| ||||||
Sbjct 173679 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173631
>seq1349
Length=1030505
Score = 107 bits (118), Expect = 1e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| ||||| || ||| |||||| ||||||||||| || | ||| | | |||| |
Sbjct 331248 CACAAGGTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCCTG 331307
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || |||||||| | |||||||||||| | ||| | || ||||| ||
Sbjct 331308 CAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCATG 331367
Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||| |||| || |||||| | || | || ||||
Sbjct 331368 GATCTTGACCTT-GATATTCACAATGCTGTCATTGGGTTCCACATGCAGACTGATGGTCT 331426
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| | || ||||||||||| || || |||||
Sbjct 331427 TGTCAGTCAGGGTCTTCACAAATATCTGCAT 331457
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||| ||| | | ||| ||||| || ||| || | | |||||||||||
Sbjct 331455 CATACCACCTGTCAAACGGAGCACAAGGTGGAGGGTGGACTTCATCTGGATGTTGTAGGT 331514
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| || | | || || |||||||| || ||| |||||| || ||||||||| |
Sbjct 331515 GGAGAGGGCGCACCCATCCTCAAGCTGCTTACCAGCATAGATCAGACACTGCTGATCAGG 331574
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | || ||||| || ||||| ||| || ||| | ||| |||| || ||
Sbjct 331575 AGGGATCCCCTCCTTATCATGGATCTTGACCTT-GATATTCACAATGCTGTCATTGGGTT 331633
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | || | || ||||| || || ||||||||||| || || |||||
Sbjct 331634 CCACATTCAGACTGATGGTCTTGCCAGTCAGGGTCTTCACAAATATCTGCAT 331685
Score = 87.8 bits (96), Expect = 1e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191
||||| | ||| |||||| ||||||||||| || ||| | || | || ||||||
Sbjct 331928 AGGTGGATGGTGGACTCCTTCTGGATGTTGTAGGTGGAGAGGTTGCCTCCATCCTCCAGC 331987
Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251
||||| |||||||||| ||||||| | | ||| | || ||||| || |||
Sbjct 331988 TGCTTAGTAGCAAAGATCAGACGCTGCAGGAAAGGAGGGATTCCCTCCTTATCGCAGATC 332047
Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311
|| ||| | | | ||| |||| | |||||||||||| || || ||||| ||
Sbjct 332048 TTGGCCTTGACATTCTCAATGCTGTCATTTGGTTCCACCTCCACGGTGATGGTCTTGCCA 332107
Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||||| ||||| |||||
Sbjct 332108 ATGTAGGTCTTCACAAAGATCTGCAT 332133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359839772366844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |