Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq11 600 1e-166
seq15 125 8e-24
>seq11
Length=11238946
Score = 600 bits (664), Expect = 1e-166
Identities = 1308/1946 (67%), Gaps = 23/1946 (1%)
Strand=Plus/Plus
Query 53085 TATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGAT 53144
|||| || || || || ||||| || ||||| || | || | ||||| || || |
Sbjct 5178229 TATTTTTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGT 5178288
Query 53145 TAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTT 53204
| || | || || || || |||| || || || ||||| || || ||||| || | ||
Sbjct 5178289 TGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTT 5178348
Query 53205 CCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCA 53264
| | |||||| || || |||| || || || ||||| || || ||||| || || | |
Sbjct 5178349 CGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGA 5178408
Query 53265 ATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG-AGGTTCCCAATTCCAA 53323
| ||| || || | |||| | |||||| || ||||| || |||| | |||||
Sbjct 5178409 GCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCC--AGTCCAA 5178466
Query 53324 -AGATCCGACGGTACAACNNNNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTAC 53380
|| || | || | | | || || || || || ||| |
Sbjct 5178467 CAGGTCGGTGGG--CGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGG 5178524
Query 53381 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 53440
|| ||| | || || |||||||| || || |||| || || || |||||||| |
Sbjct 5178525 GAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGCAGCCAGCTCGCAGCTCGCCTCGAGG 5178584
Query 53441 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 53500
|| |||| || ||||| |||||||||| | || ||| || ||||| |||| ||
Sbjct 5178585 GCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCG 5178644
Query 53501 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 53560
|| || ||| | ||| || || ||||| || || || || ||||| || || || ||
Sbjct 5178645 AACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGC 5178704
Query 53561 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 53620
|| || | ||| || || | |||||||| || | ||||| |||||||||||||| ||
Sbjct 5178705 CTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATC 5178764
Query 53621 TTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGT 53680
|| || | |||| |||||| ||| ||| |||| | ||||| |||| ||||| ||
Sbjct 5178765 TTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAA-GT 5178823
Query 53681 CC----ATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTC 53736
|| | | | || ||||||| | ||| | || |||||||||||||| ||||||||
Sbjct 5178824 CCGCTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTC 5178883
Query 53737 ATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 53795
| || | | |||| | || || ||||| ||||| || | ||||||||| || |
Sbjct 5178884 GTC-GCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCA 5178942
Query 53796 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAG 53855
||| || || || ||||| | || || ||||| || || || ||| |||| || || |
Sbjct 5178943 GATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGG 5179002
Query 53856 TTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGT 53915
||||| ||||||| ||||| || || | ||| || | ||||| | | | |||
Sbjct 5179003 TTTCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGCTTGA 5179062
Query 53916 ATCTCTTTTCTCTTTCGTATA--GTGTATACAATCGTTCAAACTCGTCTCCCCAAACATT 53973
| |||| | |||||| ||||| | || |||||||| || ||||| |
Sbjct 5179063 CGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTC--TCAAACTCCTCCCCCCAGCACTC 5179120
Query 53974 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 54033
| || || |||||||| || |||||||| | ||||| || || | || ||| |
Sbjct 5179121 ATTCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCT 5179180
Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCT 54092
||||| || | ||||| ||||| | | | || ||| || ||||||| ||| || ||||
Sbjct 5179181 CTTCATGAACAAGTCAGGGATCCACATACCGTAGAAA-AGGTCTCTGGCTCTCTGCTCCT 5179239
Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152
| ||||| || ||||| || | || ||||| | | ||||| |||||||| |||||||
Sbjct 5179240 CTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCA 5179299
Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212
||| |||| | | | ||||||| |||||||| ||||| || | || | |||||||
Sbjct 5179300 GGTACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGT 5179359
Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272
| || |||||||||| ||| || | || |||||||| |||||||| || | ||| |
Sbjct 5179360 TGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGT 5179419
Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332
| ||||| | | | || || | | | ||| || || || ||| || ||||
Sbjct 5179420 AACTTCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGA 5179479
Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392
| | ||||| |||| | ||| ||||| |||||||| || || |||||| ||||| |
Sbjct 5179480 TGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGA 5179539
Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452
| || || ||||| |||| || | | | || || |||||||| | || || || |
Sbjct 5179540 GCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGG 5179599
Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512
| || || ||||| || || || || || ||||| || || || |||| || |||||
Sbjct 5179600 CATGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTG 5179659
Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572
|||||| || || || | || | ||| | ||||||||| |||| || | | |||
Sbjct 5179660 TTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGC 5179719
Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 54632
||| || |||| || |||||| |||| |||||||| || || | ||||||||||
Sbjct 5179720 CGTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTATGAAA 5179779
Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 54692
| || || || || || || | ||||| || || || | | | || | || |
Sbjct 5179780 AATCACGGTCATATATTATGGCCGAGTTCAGGCGGTCTTTGTTCTGGAGGACGATGTCAA 5179839
Query 54693 TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAAT 54751
|| | ||| || | || ||||| || | |||| || || | ||||| |
Sbjct 5179840 GCGT-CTCCTTGGAGACCATGGGAGAGTGACGCTTATTTAGTGGGTTTATGTAGTTGTAC 5179898
Query 54752 AAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 54811
| |||| |||||| ||||| || | || ||||| || ||||| || ||||| |||||
Sbjct 5179899 AGGTCCTCCATCACGTCACTGAACACCTTCTTTGTCTCCTTGTGCAGGTTTGAGACGGCG 5179958
Query 54812 ATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCG 54871
|| | || || || ||||| || || || |||| || || ||| || | || ||
Sbjct 5179959 ATCCGTGCAGCGAGGATGGCGTAGTCAGGGTGTTTGGTGGTCAGAGTAGCAGAGATCTCT 5180018
Query 54872 GCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTC 54931
|||| || ||||| | || ||||| || |||||||| || | || ||||| ||||||
Sbjct 5180019 GCTGCCAAGGTGTCGAGCTCCACCGTGGTGACTCCATTGTACAAACCCTGGATCACCTTC 5180078
Query 54932 ATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATA 54991
|| | || | || || | | |||| ||||| ||| || || | || ||
Sbjct 5180079 ATGGTAATCTGGGCTGGGTCCACAAAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGGATG 5180138
Query 54992 CGAGATGTGATTTTATCAAACATGAC 55017
||||| ||||||||||| ||||||||
Sbjct 5180139 CGAGAGGTGATTTTATCGAACATGAC 5180164
Score = 114 bits (126), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934
|||| ||||| || ||||| || ||||||||| ||| | || ||||| || ||||| |
Sbjct 5177937 TCCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGT 5177996
Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994
||| ||| || || || ||||||||||| || | ||| || ||||| || ||||| || |
Sbjct 5177997 TCAGAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 5178056
Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045
| || | |||||||| | ||||||||| | |||| | || | |||||
Sbjct 5178057 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCACGTCGTTTGGAA 5178107
>seq15
Length=11516971
Score = 125 bits (138), Expect = 8e-24
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 54741 CATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGAT 54800
|| || || ||||| ||| | || ||||||| | ||| || || |||||||||||||
Sbjct 9314569 CACAGCTATATAAAGCCTGTCTTAC--CACTAAAGACTTTCTTGGTCTCTTTGTGTAGAT 9314626
Query 54801 TTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGG 54860
| || ||||| || | || || || ||||||||||| |||| || || ||| |||||
Sbjct 9314627 TGGACACGGCGATCCGTGCAGCCAGGATGGCATAATCAGGATATTTGGTGGTAAGAGTGG 9314686
Query 54861 CTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTT 54920
|||| | || |||| ||||||||||| || || || || |||||| | || | || |
Sbjct 9314687 CTGCAGTCTCTGCTGCCAGAGTGTCCAGCTCCACTGTGGTGACTCCACTGTACAGGCCCT 9314746
Query 54921 GGATAACCTTCAT 54933
|||| ||||||||
Sbjct 9314747 GGATCACCTTCAT 9314759
Score = 111 bits (122), Expect = 2e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 54028 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 54087
|||||||||||||||||| || || ||||| | ||| | || |||||||||| || ||
Sbjct 9313262 CACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTG 9313321
Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147
||||| || || || |||||||| || || |||||||| | | ||| |||||||||||
Sbjct 9313322 CTCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGG 9313381
Query 54148 TTCCAAGTA 54156
|||| |||
Sbjct 9313382 CTCCAGGTA 9313390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593670873910800
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