Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq10 179 4e-40 >seq10 Length=9126174 Score = 179 bits (198), Expect = 4e-40 Identities = 146/177 (82%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| || || | |||||||||||| || | |||||||| |||||||| Sbjct 6096605 CTGGAGTCCTGTGATATGTGCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAA 6096546 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||||||| || ||||| |||||||||||||||||||||||||| || ||||| ||| | Sbjct 6096545 GGGCACCCCGAGGCCCATATCCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTC 6096486 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 |||||||||||||||||| ||||||||| ||||| |||||| |||||||| Sbjct 6096485 ACACACGTAGAACTGGCACAGAGCGTGGCAGGGTGGCAGAGCCATGCTTGGCAGGTC 6096429 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 146198 CCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCA 146257 || |||| ||||| ||||| ||||| | ||| ||||||||||||||| ||||||| |||| Sbjct 6090536 CCTTGATAAACCACAGCAGTTCTTCTAAGACTCCCCTCCAGAAGACCTTCTTGGTTGTCA 6090477 Query 146258 GCAGGGGGAACTGGCC 146273 |||| || ||||| || Sbjct 6090476 GCAGTGGAAACTGACC 6090461 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 146198 CCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCA 146257 || |||| ||||| ||||| ||||| | ||| ||||||||||||||| ||||||| |||| Sbjct 6095855 CCTTGATAAACCACAGCAGTTCTTCTAAGACTCCCCTCCAGAAGACCTTCTTGGTTGTCA 6095796 Query 146258 GCAGGGGGAACTGGCC 146273 |||| || ||||| || Sbjct 6095795 GCAGTGGAAACTGACC 6095780 Score = 82.4 bits (90), Expect = 9e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| |||| || ||||||||||||||||||||||| || || ||||| || || ||| Sbjct 6096147 GTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATCTCCCTCCTC 6096088 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 | || ||||| | | || || ||| || |||||||| ||||| ||||| Sbjct 6096087 TCGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTCCCAAATCTT 6096028 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 || || || | |||||||| |||| | ||||| ||| Sbjct 6096027 TACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCCC 6095988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590026385313400