Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq10 179 4e-40
>seq10
Length=9126174
Score = 179 bits (198), Expect = 4e-40
Identities = 146/177 (82%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805
|| ||| || |||| || || | |||||||||||| || | |||||||| ||||||||
Sbjct 6096605 CTGGAGTCCTGTGATATGTGCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAA 6096546
Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865
||||||||| || ||||| |||||||||||||||||||||||||| || ||||| ||| |
Sbjct 6096545 GGGCACCCCGAGGCCCATATCCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTC 6096486
Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922
|||||||||||||||||| ||||||||| ||||| |||||| ||||||||
Sbjct 6096485 ACACACGTAGAACTGGCACAGAGCGTGGCAGGGTGGCAGAGCCATGCTTGGCAGGTC 6096429
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 146198 CCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCA 146257
|| |||| ||||| ||||| ||||| | ||| ||||||||||||||| ||||||| ||||
Sbjct 6090536 CCTTGATAAACCACAGCAGTTCTTCTAAGACTCCCCTCCAGAAGACCTTCTTGGTTGTCA 6090477
Query 146258 GCAGGGGGAACTGGCC 146273
|||| || ||||| ||
Sbjct 6090476 GCAGTGGAAACTGACC 6090461
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 146198 CCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCA 146257
|| |||| ||||| ||||| ||||| | ||| ||||||||||||||| ||||||| ||||
Sbjct 6095855 CCTTGATAAACCACAGCAGTTCTTCTAAGACTCCCCTCCAGAAGACCTTCTTGGTTGTCA 6095796
Query 146258 GCAGGGGGAACTGGCC 146273
|||| || ||||| ||
Sbjct 6095795 GCAGTGGAAACTGACC 6095780
Score = 82.4 bits (90), Expect = 9e-11
Identities = 114/160 (71%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099
|||| |||| || ||||||||||||||||||||||| || || ||||| || || |||
Sbjct 6096147 GTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATCTCCCTCCTC 6096088
Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159
| || ||||| | | || || ||| || |||||||| ||||| |||||
Sbjct 6096087 TCGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTCCCAAATCTT 6096028
Query 146160 GACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199
|| || || | |||||||| |||| | ||||| |||
Sbjct 6096027 TACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCCC 6095988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590026385313400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |