Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq15 118 9e-22
>seq15
Length=11516971
Score = 118 bits (130), Expect = 9e-22
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| | ||||| || | || |||||||| |||||
Sbjct 2477460 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2477519
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || |||||||| || ||| | |||||||||||| |||||| |||
Sbjct 2477520 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2477579
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | || |||| ||||||| || | || ||||||||||| || | |||
Sbjct 2477580 ACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2477639
Query 21159 TTGACAAATATTTGCATTTT 21178
|| ||||| || ||||| ||
Sbjct 2477640 TTTACAAAGATCTGCATGTT 2477659
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| | ||||| || | || |||||||| |||||
Sbjct 2476776 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2476835
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || |||||||| || ||| | |||||||||||| |||||| |||
Sbjct 2476836 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2476895
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | || || | ||||||| || | || ||||||||||| || | |||
Sbjct 2476896 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2476955
Query 21159 TTGACAAATATTTGCAT 21175
|| ||||| || |||||
Sbjct 2476956 TTTACAAAGATCTGCAT 2476972
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| | ||||| || | || |||||||| |||||
Sbjct 2477004 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2477063
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || |||||||| || ||| | |||||||||||| |||||| |||
Sbjct 2477064 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2477123
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | || || | ||||||| || | || ||||||||||| || | |||
Sbjct 2477124 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2477183
Query 21159 TTGACAAATATTTGCAT 21175
|| ||||| || |||||
Sbjct 2477184 TTTACAAAGATCTGCAT 2477200
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| | ||||| || | || |||||||| |||||
Sbjct 2477232 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2477291
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || |||||||| || ||| | |||||||||||| |||||| |||
Sbjct 2477292 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2477351
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | || || | ||||||| || | || ||||||||||| || | |||
Sbjct 2477352 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2477411
Query 21159 TTGACAAATATTTGCAT 21175
|| ||||| || |||||
Sbjct 2477412 TTTACAAAGATCTGCAT 2477428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422224025148860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |