Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq15 145 8e-30
seq6 113 5e-20
seq1226 111 2e-19
seq1106 96.9 4e-15
>seq15
Length=11516971
Score = 145 bits (160), Expect = 8e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || |||||||| || || ||||| |||||||| | || || || ||| |
Sbjct 2477200 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 2477141
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | ||||| || ||||| ||| | || ||
Sbjct 2477140 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 2477082
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || ||||| |||||||| || | ||||||||| |||||||||
Sbjct 2477081 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 2477022
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| |||| || || || || |||| ||||||| |||
Sbjct 2477021 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 2476973
Score = 145 bits (160), Expect = 8e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || |||||||| || || ||||| |||||||| | || || || ||| |
Sbjct 2477428 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 2477369
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | ||||| || ||||| ||| | || ||
Sbjct 2477368 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 2477310
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || ||||| |||||||| || | ||||||||| |||||||||
Sbjct 2477309 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 2477250
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| |||| || || || || |||| ||||||| |||
Sbjct 2477249 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 2477201
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || |||||||| || || ||||| |||||||| | || || || ||| |
Sbjct 2476972 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 2476913
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | ||||| || ||||| ||| | || ||
Sbjct 2476912 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 2476854
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || ||||| |||||||| || | ||||||||| |||||||||
Sbjct 2476853 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 2476794
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||| |||| || || || || |||| ||||||| ||
Sbjct 2476793 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGTGG 2476746
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || || |||||||| || || ||||| |||||||| | || || || ||
Sbjct 2477659 AACATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCC 2477600
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | | |||| || || | ||||| || ||||| ||| | ||
Sbjct 2477599 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAT 2477540
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| | || |||| || ||||| |||||||| || | ||||||||| |||||||
Sbjct 2477539 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTAC 2477480
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||||| |||| || || || || |||| ||||||| |||
Sbjct 2477479 AACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 2477429
>seq6
Length=9412079
Score = 113 bits (124), Expect = 5e-20
Identities = 159/222 (72%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| ||||| || || || || || | ||| ||||||| | | || ||| |||
Sbjct 6657186 ATGCAGATATTTGTGAAGACCCTGACTGACAAGACCATCAGTCTGAATGTGGAACCCAAT 6657245
Query 40750 GACAGC---GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| ||| | | |||||| || || | || || ||||| ||||| | ||
Sbjct 6657246 GACAGCATTGTGAATA---TCAAGGTCAAGATCCATGATAAGGAGGGGATCCCTCCTGAT 6657302
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || ||||||| || ||||| |||||| | |||| | ||||||| ||||||
Sbjct 6657303 CAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTGCAGGACGGCCACACCCTCTCTGACTAC 6657362
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTG 40908
||||||||||||||| ||| || || || ||| | || |||
Sbjct 6657363 AACATCCAGAAGGAGTTCACCCTCCACCTTGTGCTCCGTTTG 6657404
Score = 96.9 bits (106), Expect = 4e-15
Identities = 156/223 (70%), Gaps = 6/223 (3%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| ||||| || || || || || ||||| ||||||| | | || ||| |||
Sbjct 6656958 ATGCAGATATTTGTGAAGACCCTGACTGGCAAGACCATCAGTCTGAATGTGGAACCCAAT 6657017
Query 40750 GACAGC---GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| ||| | | |||||| || || | || || ||||| ||||| | ||
Sbjct 6657018 GACAGCATTGTGAATA---TCAAGGTCAAGATCCATGATAAGGAGGGGATCCCTCCTGAT 6657074
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| | || ||||| || || || ||||| || || | | || ||||| | ||||
Sbjct 6657075 CAGCAGTGTCTGATCTATGCTGGTAAGCAGCTTGAGGATGGGTGCGCCCTCTCCACCTAC 6657134
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGA 40909
|||||||||| | || |||| || || || ||| | || ||||
Sbjct 6657135 AACATCCAGATGAAGTCCACCCTCCACCTTGTGCTCCGTTTGA 6657177
Score = 86.0 bits (94), Expect = 6e-12
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
|| || ||||| ||||| | |||||||| | || ||||| || || || ||||| ||
Sbjct 6656823 GATAAGGAGGGGATCCCTCCTGACCAGCAGTGTCTGATCTATGCTGGTAAGCAGCTTGAG 6656882
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| | || ||||| ||||||||||||||||| || |||| || || || ||| |
Sbjct 6656883 GACGGGTGCTCCCTCTCTGACTACAACATCCAGAATGAATCCACCCTCCACCTTGTGCTC 6656942
Query 40903 CGCTTGA 40909
|| ||||
Sbjct 6656943 CGTTTGA 6656949
>seq1226
Length=411779
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091
|| |||||| |||| ||||| || ||||| ||||| | ||||| || || || ||
Sbjct 204509 GGAGAGCGCGTGGTAGCCTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGGTCCTTTGCT 204568
Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151
|||| || ||||| |||||| | ||||| |||||||||||||| ||| ||||||||||
Sbjct 204569 TCCATCTTCTGGCTGAAGAAAAGGGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 204628
Query 117152 ATCTCCAGGGACGAGG 117167
||| ||| |||||||
Sbjct 204629 ATCAGCAGAGACGAGG 204644
Score = 96.9 bits (106), Expect = 4e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 116800 TCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTT 116859
|| ||| ||||||||| | |||||||||||||| | ||||| |||| ||||| || ||
Sbjct 204107 TCAGGTGGAGCGTTTCACCCAGGAGGTGCAGGTCACGGAGGCCAGGTGTTTCTATGGGTT 204166
Query 116860 TCAGATCGCCATGGAGAACGTGCACTCGGAAATGTA 116895
|||||||||||||||||| | ||||| || |||||
Sbjct 204167 CCAGATCGCCATGGAGAACATCCACTCTGAGATGTA 204202
Score = 91.5 bits (100), Expect = 2e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|| || |||||| ||||||||||| || || || || ||||| || | |||| ||||
Sbjct 203688 GAACCACTGCTGAAGGAGAACCCCCGTCGCTTTGTCATCTTCCCTATCAAGTACCAGGAC 203747
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688
|| |||| |||||||| ||||| ||||| || |||||||||| || |||||
Sbjct 203748 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACCGCAGAAGAGGT 203800
>seq1106
Length=3230
Score = 96.9 bits (106), Expect = 4e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 116800 TCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTT 116859
|| ||| ||||||||| | |||||||||||||| | ||||| |||| ||||| || ||
Sbjct 2999 TCAGGTGGAGCGTTTCACCCAGGAGGTGCAGGTCACGGAGGCCAGGTGTTTCTATGGGTT 3058
Query 116860 TCAGATCGCCATGGAGAACGTGCACTCGGAAATGTA 116895
|||||||||||||||||| | ||||| || |||||
Sbjct 3059 CCAGATCGCCATGGAGAACATCCACTCTGAGATGTA 3094
Score = 91.5 bits (100), Expect = 2e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|| || |||||| ||||||||||| || || || || ||||| || | |||| ||||
Sbjct 2580 GAACCACTGCTGAAGGAGAACCCCCGTCGCTTTGTCATCTTCCCTATCAAGTACCAGGAC 2639
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688
|| |||| |||||||| ||||| ||||| || |||||||||| || |||||
Sbjct 2640 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACCGCAGAAGAGGT 2692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515175180959600
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