Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq9 246 2e-60
seq21 104 2e-17
>seq9
Length=13922460
Score = 246 bits (272), Expect = 2e-60
Identities = 597/893 (67%), Gaps = 16/893 (2%)
Strand=Plus/Minus
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| ||||| | || ||| |||||||||||| || ||||| |||||| ||||||| ||
Sbjct 8684513 CCTCTGAGCGAGGAGGAGAGAGACTTCCCCATCGCTTACTCCATGGTGATCCATGACAAC 8684454
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
|| || | || || ||||| ||||| ||| | || ||||||||||| | ||||| ||
Sbjct 8684453 ATCGAGATGTTCGAGCGGCTCCTGCGGGCCATCTACACCCCTCAGAACGTCTACTGCGTT 8684394
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
|| |||||| ||| ||| || ||||| | ||| ||| || ||||||||||||
Sbjct 8684393 CATGTGGATCAGAAATCCAAGGATGAATTCAAGGCGGCCGTCGTGGGGATTATTTCCTGC 8684334
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
|||| || || ||| |||||| || || | ||||| || || || |||||| |
Sbjct 8684333 CTCCCTAACGTGTTCCTGGCCACCAAATTAGAAAGCGTGGTGTACGCGTCGTGGTCCCGC 8684274
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987
|| || || ||| ||||||| ||| ||| |||| | | || ||||||||||
Sbjct 8684273 GTACAGGCGGACTTGAACTGCATGAGAGATCTGCTGGACTCCAAGGTTAAATGGAAGTAC 8684214
Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047
| ||||| ||||||||| | ||||||||||| || ||||| |||||||| | | |
Sbjct 8684213 ATGCTGAACACATGCGGGGCCGACTTCCCCATCAAAACCAACAGGGAGATGGTGCAGACG 8684154
Query 108048 CTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG-GTACCTTCTGAGTCCaaaaa 108106
|| |||| ||||||| | |||||| |||||||| ||| ||| | ||| ||||||
Sbjct 8684153 CTGAAGACCCTGAAGGGCAGGAACAGCATGGAGTCCGAGACCACCAAC-GAGAACAAAAA 8684095
Query 108107 aaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAG-CAAGATGA 108165
|| ||| |||| | | |||| || || || | | | ||| | | ||
Sbjct 8684094 GGGCCGGTGGCTGTACCACCACCAGGTCACGGATGAGGTG-ATCAGAACAGACGTGGAGA 8684036
Query 108166 AGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTC 108225
| ||| || || || ||||||||| | || |||||||| || |||| ||
Sbjct 8684035 AAAGCCCCCCGCCCATAAAAACGCCCATGTTCTCCGGAAATGCCTACTTCGTGGTGTCGA 8683976
Query 108226 GAGCCTTTGTCCAACATGTCTTAGACA-ACCCTAAATCCCAAAGACTGGTTGAATGGGTC 108284
|| | || || ||||| || | |||| || | || || || | || ||||
Sbjct 8683975 GAACTTTCGTGCAACACGTGAT-GACAGACGCAAAGGTGCAGGAGCTCCTGGAGTGGGAG 8683917
Query 108285 AAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCG--TGCTCCGTGGA 108342
|| |||||||| || || ||||| ||||| ||||||||||| ||| | ||| | |
Sbjct 8683916 AAGGACACCTACAGTCCGGACGAGCACCTGTGGGCCACCCTGCAGAGGATGCCCACAG-- 8683859
Query 108343 TGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCA 108402
| || || || | || | || |||||| ||| || |||||| ||| | ||
Sbjct 8683858 TCCCCGGGTCATTGCCCCACAACAACAAGTACGACACGTCGGACATGCTGGCCCTGGCGC 8683799
Query 108403 GGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCT 108462
| | ||||||||| ||| | ||| ||||| ||||||| || || |||||
Sbjct 8683798 GCGTGGTCAAGTGGAGCTACTTGGCGGGTGATGTGGAACTGGGGGCCCCATACCGACCCT 8683739
Query 108463 GCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTC 108522
|| | || | | |||| || | || | ||||| | |||||| | | ||| | |
Sbjct 8683738 GCACCGGGGACTACAGGAGAGCGGTGTGTGTGTACGGAGTAGGGGACATCCAGTGGCTCC 8683679
Query 108523 TC---CAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGAT 108572
|| |||| | || || || ||||||||||| || || | | ||||||
Sbjct 8683678 TCGCACAGA---AACAACTATTCGCAAACAAGTTCGATCCTCAGATCGATGAT 8683629
>seq21
Length=14900632
Score = 104 bits (114), Expect = 2e-17
Identities = 145/202 (72%), Gaps = 6/202 (3%)
Strand=Plus/Minus
Query 107754 AACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTG 107813
|||||||| | || ||| | ||| | ||||| ||||| ||||| |||||||| || |||
Sbjct 8765956 AACTTTGAGAGACTTCTGAGGGCCATTTATGCTCCTCAAAACATTTACTGTGTTCATGTG 8765897
Query 107814 GATGTGAAGTCCCCAGAGACTTTCAAAGAG---GCGGTCAAGGCCATTATTTCCTGCTTC 107870
|| || ||| || | | | | || || |||| ||||||| | |||||||||
Sbjct 8765896 GACAAAAAATCCA---AGCCCTCCTATCAGTCTGCCGTCAGGGCCATTGTCTCCTGCTTC 8765840
Query 107871 CCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTG 107930
||||| || ||||| | ||| | || ||||| |||||| ||||||| | ||
Sbjct 8765839 CCCAACGTTTTCATCGTCAGCCGGCCTGTGGATGTGGTCTATGCCAGCTGGTCCCGCGTT 8765780
Query 107931 CAAGCTGACCTGAACTGTATGG 107952
||||||||| | ||||||||||
Sbjct 8765779 CAAGCTGACATTAACTGTATGG 8765758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348239788664790
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