Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq9 246 2e-60 seq21 104 2e-17 >seq9 Length=13922460 Score = 246 bits (272), Expect = 2e-60 Identities = 597/893 (67%), Gaps = 16/893 (2%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || ||||| | || ||| |||||||||||| || ||||| |||||| ||||||| || Sbjct 8684513 CCTCTGAGCGAGGAGGAGAGAGACTTCCCCATCGCTTACTCCATGGTGATCCATGACAAC 8684454 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 || || | || || ||||| ||||| ||| | || ||||||||||| | ||||| || Sbjct 8684453 ATCGAGATGTTCGAGCGGCTCCTGCGGGCCATCTACACCCCTCAGAACGTCTACTGCGTT 8684394 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 || |||||| ||| ||| || ||||| | ||| ||| || |||||||||||| Sbjct 8684393 CATGTGGATCAGAAATCCAAGGATGAATTCAAGGCGGCCGTCGTGGGGATTATTTCCTGC 8684334 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 |||| || || ||| |||||| || || | ||||| || || || |||||| | Sbjct 8684333 CTCCCTAACGTGTTCCTGGCCACCAAATTAGAAAGCGTGGTGTACGCGTCGTGGTCCCGC 8684274 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987 || || || ||| ||||||| ||| ||| |||| | | || |||||||||| Sbjct 8684273 GTACAGGCGGACTTGAACTGCATGAGAGATCTGCTGGACTCCAAGGTTAAATGGAAGTAC 8684214 Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047 | ||||| ||||||||| | ||||||||||| || ||||| |||||||| | | | Sbjct 8684213 ATGCTGAACACATGCGGGGCCGACTTCCCCATCAAAACCAACAGGGAGATGGTGCAGACG 8684154 Query 108048 CTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG-GTACCTTCTGAGTCCaaaaa 108106 || |||| ||||||| | |||||| |||||||| ||| ||| | ||| |||||| Sbjct 8684153 CTGAAGACCCTGAAGGGCAGGAACAGCATGGAGTCCGAGACCACCAAC-GAGAACAAAAA 8684095 Query 108107 aaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAG-CAAGATGA 108165 || ||| |||| | | |||| || || || | | | ||| | | || Sbjct 8684094 GGGCCGGTGGCTGTACCACCACCAGGTCACGGATGAGGTG-ATCAGAACAGACGTGGAGA 8684036 Query 108166 AGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTC 108225 | ||| || || || ||||||||| | || |||||||| || |||| || Sbjct 8684035 AAAGCCCCCCGCCCATAAAAACGCCCATGTTCTCCGGAAATGCCTACTTCGTGGTGTCGA 8683976 Query 108226 GAGCCTTTGTCCAACATGTCTTAGACA-ACCCTAAATCCCAAAGACTGGTTGAATGGGTC 108284 || | || || ||||| || | |||| || | || || || | || |||| Sbjct 8683975 GAACTTTCGTGCAACACGTGAT-GACAGACGCAAAGGTGCAGGAGCTCCTGGAGTGGGAG 8683917 Query 108285 AAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCG--TGCTCCGTGGA 108342 || |||||||| || || ||||| ||||| ||||||||||| ||| | ||| | | Sbjct 8683916 AAGGACACCTACAGTCCGGACGAGCACCTGTGGGCCACCCTGCAGAGGATGCCCACAG-- 8683859 Query 108343 TGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCA 108402 | || || || | || | || |||||| ||| || |||||| ||| | || Sbjct 8683858 TCCCCGGGTCATTGCCCCACAACAACAAGTACGACACGTCGGACATGCTGGCCCTGGCGC 8683799 Query 108403 GGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCT 108462 | | ||||||||| ||| | ||| ||||| ||||||| || || ||||| Sbjct 8683798 GCGTGGTCAAGTGGAGCTACTTGGCGGGTGATGTGGAACTGGGGGCCCCATACCGACCCT 8683739 Query 108463 GCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTC 108522 || | || | | |||| || | || | ||||| | |||||| | | ||| | | Sbjct 8683738 GCACCGGGGACTACAGGAGAGCGGTGTGTGTGTACGGAGTAGGGGACATCCAGTGGCTCC 8683679 Query 108523 TC---CAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGAT 108572 || |||| | || || || ||||||||||| || || | | |||||| Sbjct 8683678 TCGCACAGA---AACAACTATTCGCAAACAAGTTCGATCCTCAGATCGATGAT 8683629 >seq21 Length=14900632 Score = 104 bits (114), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 107754 AACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTG 107813 |||||||| | || ||| | ||| | ||||| ||||| ||||| |||||||| || ||| Sbjct 8765956 AACTTTGAGAGACTTCTGAGGGCCATTTATGCTCCTCAAAACATTTACTGTGTTCATGTG 8765897 Query 107814 GATGTGAAGTCCCCAGAGACTTTCAAAGAG---GCGGTCAAGGCCATTATTTCCTGCTTC 107870 || || ||| || | | | | || || |||| ||||||| | ||||||||| Sbjct 8765896 GACAAAAAATCCA---AGCCCTCCTATCAGTCTGCCGTCAGGGCCATTGTCTCCTGCTTC 8765840 Query 107871 CCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTG 107930 ||||| || ||||| | ||| | || ||||| |||||| ||||||| | || Sbjct 8765839 CCCAACGTTTTCATCGTCAGCCGGCCTGTGGATGTGGTCTATGCCAGCTGGTCCCGCGTT 8765780 Query 107931 CAAGCTGACCTGAACTGTATGG 107952 ||||||||| | |||||||||| Sbjct 8765779 CAAGCTGACATTAACTGTATGG 8765758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348239788664790