Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq11 147 5e-30 >seq11 Length=11238946 Score = 147 bits (162), Expect = 5e-30 Identities = 392/594 (66%), Gaps = 9/594 (2%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| ||||||| | || ||||| |||||| || || || | || || | ||||| Sbjct 5179774 TACAATTTCTTCGGCTTTAAAACCCTGGAGCGGTCCTACCTGTTGAAGATCAACGGCAAA 5179715 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCA-CAAGGATGA 248936 | | || ||| ||||||||| | ||| | || |||| ||||| || ||| | || Sbjct 5179714 GTGGCCGAGCGACCGCAGCACATGCTCATGAGGGTTTCTGTGGGGATCCATCAAACA-GA 5179656 Query 248937 CATAGAGAGCGTGCTCGAGACGTACACCGGAATG--AGTGAACGCTGGATGACACATGCC 248994 || || | | | || || |||| | || || ||| ||| | || |||||| Sbjct 5179655 TATTGATGCAGCGATTGAAACCTACAACCTGCTGTCAGAGAAG--TGGTTCACCCATGCC 5179598 Query 248995 ACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTT 249054 | ||||| ||||| || || |||||| || |||||| | ||||| || || Sbjct 5179597 TCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTC 5179538 Query 249055 GCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATT 249114 |||||| | || ||| |||| ||||||||||||||||| |||||| ||| || Sbjct 5179537 GCCATGAAGGATGACAGCATCGAGGGCATTTATGACACGCTGAAACAGTGCGCGCTCATC 5179478 Query 249115 TCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTAC 249174 || || | || || ||||||||| | ||||| | |||| || | | ||| ||| Sbjct 5179477 TCCAAGTCGGCTGGAGGAATCGGTGTGGCCGTCAGCTGCATCAGATCTACGGGAAGTTAC 5179418 Query 249175 ATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCC 249234 ||| || || ||||| | |||| | || ||| | || || | | | Sbjct 5179417 ATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACAAC 5179358 Query 249235 ACCGCCAGGTTCATCAACCAGGCCGGGCGCCGAAAG---GGGTCGTTCGCCATGTATTTG 249291 ||||| | | | |||||| || | | | ||| | ||||||||||| || Sbjct 5179357 ACCGCACGCTATGTGGACCAGGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACCTG 5179298 Query 249292 GAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAG 249351 ||| ||||| |||||||||| || |||||||| ||||| ||||||| || || ||| Sbjct 5179297 GAACCCTGGCATTCCGATATATTTGACTTCCTGGAGTTGAAGAAGAACACTGGAAAAGAG 5179238 Query 249352 CTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 |||||| | ||||| |||||||| ||||| || | |||||||||||| Sbjct 5179237 GAGCAGAGAGCCAGAGACCTTTTCTACGGTATGTGGATCCCTGACTTGTTCATG 5179184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073672366585280