Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq11 147 5e-30
>seq11
Length=11238946
Score = 147 bits (162), Expect = 5e-30
Identities = 392/594 (66%), Gaps = 9/594 (2%)
Strand=Plus/Minus
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| ||||||| | || ||||| |||||| || || || | || || | |||||
Sbjct 5179774 TACAATTTCTTCGGCTTTAAAACCCTGGAGCGGTCCTACCTGTTGAAGATCAACGGCAAA 5179715
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCA-CAAGGATGA 248936
| | || ||| ||||||||| | ||| | || |||| ||||| || ||| | ||
Sbjct 5179714 GTGGCCGAGCGACCGCAGCACATGCTCATGAGGGTTTCTGTGGGGATCCATCAAACA-GA 5179656
Query 248937 CATAGAGAGCGTGCTCGAGACGTACACCGGAATG--AGTGAACGCTGGATGACACATGCC 248994
|| || | | | || || |||| | || || ||| ||| | || ||||||
Sbjct 5179655 TATTGATGCAGCGATTGAAACCTACAACCTGCTGTCAGAGAAG--TGGTTCACCCATGCC 5179598
Query 248995 ACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTT 249054
| ||||| ||||| || || |||||| || |||||| | ||||| || ||
Sbjct 5179597 TCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTC 5179538
Query 249055 GCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATT 249114
|||||| | || ||| |||| ||||||||||||||||| |||||| ||| ||
Sbjct 5179537 GCCATGAAGGATGACAGCATCGAGGGCATTTATGACACGCTGAAACAGTGCGCGCTCATC 5179478
Query 249115 TCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTAC 249174
|| || | || || ||||||||| | ||||| | |||| || | | ||| |||
Sbjct 5179477 TCCAAGTCGGCTGGAGGAATCGGTGTGGCCGTCAGCTGCATCAGATCTACGGGAAGTTAC 5179418
Query 249175 ATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCC 249234
||| || || ||||| | |||| | || ||| | || || | | |
Sbjct 5179417 ATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACAAC 5179358
Query 249235 ACCGCCAGGTTCATCAACCAGGCCGGGCGCCGAAAG---GGGTCGTTCGCCATGTATTTG 249291
||||| | | | |||||| || | | | ||| | ||||||||||| ||
Sbjct 5179357 ACCGCACGCTATGTGGACCAGGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACCTG 5179298
Query 249292 GAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAG 249351
||| ||||| |||||||||| || |||||||| ||||| ||||||| || || |||
Sbjct 5179297 GAACCCTGGCATTCCGATATATTTGACTTCCTGGAGTTGAAGAAGAACACTGGAAAAGAG 5179238
Query 249352 CTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405
|||||| | ||||| |||||||| ||||| || | ||||||||||||
Sbjct 5179237 GAGCAGAGAGCCAGAGACCTTTTCTACGGTATGTGGATCCCTGACTTGTTCATG 5179184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073672366585280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |