Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq11 520 8e-143 seq15 129 5e-25 >seq11 Length=11238946 Score = 520 bits (576), Expect = 8e-143 Identities = 1088/1611 (68%), Gaps = 31/1611 (2%) Strand=Plus/Plus Query 22388 ATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGA 22447 |||| | |||||| || ||||||||||| || | | |||| ||||||| || Sbjct 5178222 ATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGG 5178281 Query 22448 TGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTG 22507 ||| |||| || | || ||||| ||||||| ||| | ||| ||| |||||| ||| Sbjct 5178282 TGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTG 5178341 Query 22508 AACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGC 22567 | | ||||| ||| || ||||| ||||| ||||| ||||| || ||||| |||||||| Sbjct 5178342 TAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGG 5178401 Query 22568 GCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAG 22627 || || || || ||| |||| ||||||||| | ||||| ||| |||| | |||| Sbjct 5178402 GCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAG 5178461 Query 22628 TCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTC 22687 ||| |||| |||| |||||| || |||||||| ||||| || | | ||| || Sbjct 5178462 TCCAACAGGTCGGTGGGCGTC---TTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTG 5178518 Query 22688 GCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCG-CGGCAAGTTCGCAGCTCGC 22746 ||||| ||||||||| |||||||| || || | ||| | || || ||||||||||| Sbjct 5178519 ACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCG-AGCTCGGCAGCCAGCTCGCAGCTCGC 5178577 Query 22747 CTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA-ATTCGGCGGCGGCGA 22805 ||| | || |||| || || ||||||||||| | |||||| | | | | | || Sbjct 5178578 CTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAG-CTTCGG 5178636 Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865 ||||||| |||| |||||| | | ||| ||||| |||| |||||| || || || | Sbjct 5178637 GGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTC 5178696 Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAAT 22925 | || || | || | || ||| | || ||||||| ||||| |||| || Sbjct 5178697 CTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATAT 5178756 Query 22926 CGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGT 22985 | || | ||||||||||| || || | || || | | ||||| Sbjct 5178757 CTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGT 5178816 Query 22986 CGTAAACGCCCGATT----GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCAT 23041 | ||| | ||| | || || || |||||| |||| ||||| ||||| || Sbjct 5178817 C--AAAAGTCCGCTCAGCGGTG--ACGTACATGTTGAGTGCGACGGAGGCCAGATTACAA 5178872 Query 23042 ACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT 23101 || || |||||||| || ||||| || |||||||| || ||||||||||| | ||| Sbjct 5178873 ACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTG 5178932 Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161 || ||||||| ||| ||||||||| || | |||||| | ||| |||||||||||||| Sbjct 5178933 ATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTAT 5178992 Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221 || ||||| || || ||| ||||| ||||| || |||| | ||| || | || Sbjct 5178993 GGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACC 5179052 Query 23222 CGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCG 23281 ||| | | |||||||| |||||| || ||| | | ||||| || | || Sbjct 5179053 ACACGCTTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCC 5179112 Query 23282 TAACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTCATT 23340 | || || ||| ||||| ||| | || |||||||| ||| ||| || | | Sbjct 5179113 CAGCACTCATTCAGCCCGGGACATT-CGTCTGGACACATTAGAGACCAGTCCTGGTTACT 5179171 Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 || || | |||| || | || || ||||| | | ||||||| || || | ||| | Sbjct 5179172 CTCCACCCTCTTCATGAACAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCT 5179231 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | ||||||||| || |||||||| ||||| |||| ||||| || | || | |||||| Sbjct 5179232 CTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCA 5179291 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 || || ||||| | ||| || || || || ||||| || || ||||| || || || || Sbjct 5179292 GGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCG 5179351 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 || ||||||||||| ||||| ||||| || || || || ||||| ||| ||| Sbjct 5179352 TGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCC 5179411 Query 23581 CGCCA---CACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCC 23637 || | ||| || | | || | | | ||| | ||| || ||||| | Sbjct 5179412 AGCGATGTAACT---TCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGC 5179468 Query 23638 CGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC 23697 ||| || || || | |||||| |||||||| ||||| || ||||||||||||||||| || Sbjct 5179469 CGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATC 5179528 Query 23698 TTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAG 23757 || | |||| || ||| || |||| || | || ||| | || || || Sbjct 5179529 CTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAG 5179588 Query 23758 TGTCGGGCTGGCGTGCGTAAAGTATCCA-TTC---GACATTAGATTGTACGTGTCGATGG 23813 ||||||| ||| || || || ||| ||| |||| || ||||| || || || | Sbjct 5179589 TGTCGGGGAGGCATGGGTGAA----CCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCG 5179644 Query 23814 CGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873 | |||||||| || | || || || | | || | ||| | ||||| || |||| Sbjct 5179645 CTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTC 5179704 Query 23874 TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAA 23933 |||| || |||||| || || ||||| || || || | || |||||||| || | Sbjct 5179705 GCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGA 5179764 Query 23934 AATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGT 23984 | | | || ||| ||||| || | | ||||||||| |||| |||| Sbjct 5179765 AGAAATTGTATGAAAAATCACGGTCATATATTATGGCCGAGTTCAGGCGGT 5179815 >seq15 Length=11516971 Score = 129 bits (142), Expect = 5e-25 Identities = 124/159 (78%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 |||| || ||| ||||||| || || || ||||| | |||| ||||||| || | ||| | Sbjct 9313258 TTTCCACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCC 9313317 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | |||||||||||| ||||||||||||| |||| || | ||||| || | ||||| Sbjct 9313318 TCTGCTCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCC 9313377 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTAT 23498 ||||||| ||||| || ||||| || || ||||||| || Sbjct 9313378 ACGGCTCCAGGTACACAGCAAAGGCTCCAGGTCTCTGAT 9313416 Score = 118 bits (130), Expect = 9e-22 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 |||||| |||||| ||||||||||||||| || || || |||||||| | || || || Sbjct 9312813 CACCTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGT 9312872 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 ||||| || ||||||||| || | ||||| | ||||||||||||||||| || || Sbjct 9312873 GCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGT 9312932 Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 ||| || || || ||||||||||| || ||||| Sbjct 9312933 GCCGGTTTCTGTTTGAGACTCGATGATGGCGTACCACA 9312970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445728314833200