Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq11 616 2e-171
seq15 114 2e-20
seq1226 93.3 5e-14
>seq11
Length=11238946
Score = 616 bits (682), Expect = 2e-171
Identities = 1325/1975 (67%), Gaps = 23/1975 (1%)
Strand=Plus/Plus
Query 62294 CTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62353
|||||||||||| | | || | | |||| || || || || ||||| || ||
Sbjct 5178200 CTGAATGGATCCGTTGTGAGCGATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCCCT 5178259
Query 62354 CTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCT 62413
||| || | || | ||||| || ||||| || | ||||| || || |||| || ||
Sbjct 5178260 CTCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCT 5178319
Query 62414 CCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGC 62473
|| ||||| || || ||||| || | ||| | ||||| || || |||| || || ||
Sbjct 5178320 GCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGC 5178379
Query 62474 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62533
||||| || || ||||| || || | | | ||| || || | |||| | |||
Sbjct 5178380 GGTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGAT 5178439
Query 62534 TTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG-------TACAACANNNNNNN 62586
||| || ||||| | | ||| | | | || || | || | | |||
Sbjct 5178440 TTTTTCCTTTAGCAGCTTCCAGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGTCG-- 5178497
Query 62587 NNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGTCCTT 62646
|| || || || || || ||| | || ||| | || || || ||||| ||
Sbjct 5178498 -----TACTGAAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGA 5178552
Query 62647 CCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCT 62706
|| |||| || | || |||||||| | || |||| || ||||| || |||||||
Sbjct 5178553 GCTCGGCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCT 5178612
Query 62707 TCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGT 62766
| || ||| || ||||| ||||| || || || ||| | ||| || || ||||
Sbjct 5178613 GGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGT 5178672
Query 62767 CCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTT 62826
| || || || || ||||| || || || || || || | ||| || || | |||||||
Sbjct 5178673 CGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTT 5178732
Query 62827 CTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGA 62886
| || | ||||| |||||||||||||| || || || | ||| |||||| ||| |||
Sbjct 5178733 CGGGCACTGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGG 5178792
Query 62887 CCACATCCTTCAGTTTGAGAAAATCAAAT---CGCCCATCTATTACAAACATGTTCAATG 62943
|||| | ||||| |||| ||||| ||| || | | || ||||||| | ||
Sbjct 5178793 TCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACATGTTGAGTG 5178852
Query 62944 CAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCA 63002
| || || ||||||||||| || |||||||| | || | | |||| | || ||
Sbjct 5178853 CGACGGAGGCCAGATTACAAACCGCTACCTCGTC-GCTGCTGGTGTATTCCACAATTTCT 5178911
Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062
||||| ||||| || | |||||| || || | ||| || || || ||||| | || ||
Sbjct 5178912 GTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAG 5178971
Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122
||||| || || || ||| ||||||| || |||||| |||| || ||||| || || | |
Sbjct 5178972 GCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGC 5179031
Query 63123 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATAC 63182
|| || | ||||| | | | ||| | | |||| | |||||| || ||
Sbjct 5179032 CAAACCTGCTGGGCCTTCACCACACGCTTGACGCGGCCTTCTTTCTCGTATTTGGTGTAG 5179091
Query 63183 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATC 63242
| || ||||| || ||||| | | || | |||||||| || ||||||||
Sbjct 5179092 AGCTTCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATT 5179151
Query 63243 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63301
| ||||| || || | || ||| | ||||| || | ||||| ||||| | | |
Sbjct 5179152 AGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCCACATACCG 5179211
Query 63302 TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63361
|| ||| || ||||| | ||| || ||||| ||||| || ||||| || | || |||||
Sbjct 5179212 TAGAAA-AGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAA 5179270
Query 63362 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63421
| | ||||| |||||||| ||||||| ||| ||||| | | | ||||||| |||||
Sbjct 5179271 GTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTT 5179330
Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481
||| ||||| || | || | |||||||| || |||||||||| ||| || | || ||
Sbjct 5179331 TCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCC 5179390
Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGA 63541
|| || | |||||||| || | ||| || | ||| | | | || || | |
Sbjct 5179391 ATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGATCTGATGCAGCTGACGGC 5179450
Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601
| ||| ||||| || ||| || ||||| | ||||| |||| | ||||||||| ||
Sbjct 5179451 CACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAAT 5179510
Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGT 63661
||| || ||||| ||||| ||||| || || || ||||| |||| || | | |
Sbjct 5179511 GCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTT 5179570
Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721
|| || |||||||| | || || || || || || ||||| || || || || || ||
Sbjct 5179571 GGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCACTTCTCTGACAGCAGGTT 5179630
Query 63722 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63781
||| || ||||| |||| || ||||| |||||| || || || | || | ||| |
Sbjct 5179631 GTAGGTTTCAATCGCTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAG 5179690
Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841
||||||||| |||| || | | |||| ||| || ||||||| |||||| ||||
Sbjct 5179691 CATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCCAG 5179750
Query 63842 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901
|||||||| || || | ||||||||||| || || || || || || |||| || ||
Sbjct 5179751 GGTTTTAAAGCCGAAGAAATTGTATGAAAAATCACGGTCATATATTATGGCCGAGTTCAG 5179810
Query 63902 CTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT-GAAATAATCGGAGAATGTT 63960
|| || | | | || || || | || | ||| || | || ||||| ||
Sbjct 5179811 GCGGTCTTTGTTCTGGAGGACGATGTCAAGCGT-CTCCTTGGAGACCATGGGAGAGTGAC 5179869
Query 63961 TCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttt 64020
| |||| || || | |||||| | | ||||||||||| ||||| || | || |
Sbjct 5179870 GCTTATTTAGTGGGTTTATGTAGTTGTACAGGTCCTCCATCACGTCACTGAACACCTTCT 5179929
Query 64021 ttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGAT 64080
|||| |||||||| || ||||| | ||| || | || || || ||||| || || || |
Sbjct 5179930 TTGTCTCCTTGTGCAGGTTTGAGACGGCGATCCGTGCAGCGAGGATGGCGTAGTCAGGGT 5179989
Query 64081 GTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTA 64140
||| || || ||| || | || || ||||||| ||||| | || ||||| || |
Sbjct 5179990 GTTTGGTGGTCAGAGTAGCAGAGATCTCTGCTGCCAAGGTGTCGAGCTCCACCGTGGTGA 5180049
Query 64141 CTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCG 64200
||||||| || | || || || |||||||| | || | || || | | || |
Sbjct 5180050 CTCCATTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCTGGGTCCACAAAGTCAG 5180109
Query 64201 TGTTTAAGCCATAGCACAATTTTCTAATACGAGACGTGATTTTATCAAACATGAC 64255
||||| ||| ||||||| || || ||||| ||||||||||| ||||||||
Sbjct 5180110 CGTTTAGGCCGTAGCACAGCTTCTGGATGCGAGAGGTGATTTTATCGAACATGAC 5180164
Score = 114 bits (126), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172
|||| ||||| || ||||| || ||||||||| ||| | || ||||| || ||||| |
Sbjct 5177937 TCCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGT 5177996
Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232
||| ||| || || || ||||||||||| || | ||| || ||||| || ||||| || |
Sbjct 5177997 TCAGAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 5178056
Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283
| || | |||||||| | ||||||||| | |||| | || | |||||
Sbjct 5178057 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCACGTCGTTTGGAA 5178107
>seq15
Length=11516971
Score = 114 bits (126), Expect = 2e-20
Identities = 125/166 (75%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065
||||||| | ||| || || || ||||||||||| || | ||| || | || || || |
Sbjct 9314594 CACTAAAGACTTTCTTGGTCTCTTTGTGTAGATTGGACACGGCGATCCGTGCAGCCAGGA 9314653
Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64125
|||||||||| |||| || || ||| ||||||||| | || ||||||||||||||||
Sbjct 9314654 TGGCATAATCAGGATATTTGGTGGTAAGAGTGGCTGCAGTCTCTGCTGCCAGAGTGTCCA 9314713
Query 64126 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64171
|| || || || |||||| | || | || || || ||||||||
Sbjct 9314714 GCTCCACTGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 9314759
Score = 107 bits (118), Expect = 2e-18
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 63266 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATG 63325
|||||||||||||||||| || || ||||| | ||| | || |||||||| | || ||
Sbjct 9313262 CACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTG 9313321
Query 63326 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63385
||||| || || || |||||||| || || |||||||| | | ||| |||||||||||
Sbjct 9313322 CTCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGG 9313381
Query 63386 TTCCAAGTATATGGCCATAACTCCAGG 63412
|||| ||| | || | |||||||
Sbjct 9313382 CTCCAGGTACACAGCAAAGGCTCCAGG 9313408
>seq1226
Length=411779
Score = 93.3 bits (102), Expect = 5e-14
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||||||||| || || | ||||| || || || || |||||||| ||||| | || |
Sbjct 204644 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCCCTTTTCT 204585
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| || |||||||| || || || || ||||| || || || || ||||||||||
Sbjct 204584 TCAGCCAGAAGATGGAAGCAAAGGACCCAGAGAAGAAAATACCCTCCACGGCAGCAAAGG 204525
Query 33724 C 33724
|
Sbjct 204524 C 204524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629763789958800
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