Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq11 163 3e-35
>seq11
Length=11238946
Score = 163 bits (180), Expect = 3e-35
Identities = 912/1440 (63%), Gaps = 31/1440 (2%)
Strand=Plus/Plus
Query 37123 AGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTA 37182
||||| || || |||| ||| || || || || | || || | || || || |||||
Sbjct 5178279 AGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTG 5178338
Query 37183 GTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATT 37242
|| || | ||| || ||||| || || | | || || | || || || || |||||
Sbjct 5178339 GTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATC 5178398
Query 37243 GGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTC 37302
|| |||| || || || || |||| || || | ||| | | ||||| |||
Sbjct 5178399 GGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTC 5178458
Query 37303 CAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTC 37362
|| ||| | | || || || |||| |||||| || || || || || || || ||
Sbjct 5178459 CAGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTG 5178518
Query 37363 GCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGAT 37422
| || || | | || || || || || ||| ||| || ||||| || |
Sbjct 5178519 ACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGCAGCCAGCTCGCAGCTCGCC 5178578
Query 37423 TCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCG 37482
|| || || || || || || || ||||| || || | || | | | ||||| |
Sbjct 5178579 TCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGG 5178638
Query 37483 CTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCT 37542
|| ||||| | || | || | || || | || ||||||||||| |||||||| |||
Sbjct 5178639 CTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCT 5178698
Query 37543 ATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCT 37602
|| || || || ||| || || | | ||| ||||||||| ||||| ||||||
Sbjct 5178699 ATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCT 5178758
Query 37603 ATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAA---C 37659
|| || || || | ||||| || | || || || | | | | || | ||| |
Sbjct 5178759 ATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCAC-AGCAGCTAGTTTTTGAAAGTC 5178817
Query 37660 ATAAATACGTTA-----TTATTAACAAATTTACT-CAACGAAATAGATCCTAGATTACAT 37713
| || | || | | | ||| || | | | ||| || | ||||||||
Sbjct 5178818 AAAAGTCCGCTCAGCGGTGACGTACATGTTGAGTGCGACG-----GAGGCCAGATTACAA 5178872
Query 37714 ACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTA 37773
|| || || || || | | | ||| | ||| ||||| || ||||| || | |||
Sbjct 5178873 ACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCT-GCTCTT 5178931
Query 37774 -ATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATA 37832
|| || |||| ||| || ||| || |||| || | |||||| || || || ||
Sbjct 5178932 GATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTA 5178991
Query 37833 CGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTG--CTTTA 37890
|| || || ||| | || | ||| || || | | ||| || || || | ||| |
Sbjct 5178992 TGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCA-AACCTGCTGGGCCTTCA 5179050
Query 37891 ACGATCGCTTTAAttttt-ttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATT 37949
| ||||| | |||||| | |||||| | || | || | ||| || |
Sbjct 5179051 CCACACGCTTGACGCGGCCTTCTTTCT--CGTATTTGGTGTAGAGCTTCTCAAACTCCTC 5179108
Query 37950 CCCCCATACATCGCAT--AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCA 38007
|||||| || | ||| | || ||||||||| |||||||||||||||||| || |
Sbjct 5179109 CCCCCAG-CA-CTCATTCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGG 5179166
Query 38008 TCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAA-TCTTT 38066
| | || || | | ||| || || ||||| | ||| | | | ||| | || ||| |
Sbjct 5179167 TTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCCACA-TACCGTAGAAAAGGTCTCT 5179225
Query 38067 GGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTT-AGAAAATCGAATATATCAG 38125
|| ||| | || || || || ||||| ||| | || || || || |||||||| |
Sbjct 5179226 GGCTCTCTGCTCCTCTTTTCCAGTGTTCTT-CTTCAACTCCAGGAAGTCAAATATATCGG 5179284
Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185
||||| ||||| | || || | | || || || || || | || ||||| | |
Sbjct 5179285 AATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCA 5179344
Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245
||| | | ||||| || || | ||| | ||| || || | ||||| || ||||| |
Sbjct 5179345 CATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCAT 5179404
Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305
| | || | || ||| | ||| ||| || || || | | || || ||||| |
Sbjct 5179405 TGGTGCCAGCGATGTAACTTCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTC 5179464
Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365
| || || || || | ||||| ||||| | ||| ||| | || || || || ||||
Sbjct 5179465 CAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGT 5179524
Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425
||||||| || | || | || || || |||| || ||| || || || ||||
Sbjct 5179525 CATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAA 5179584
Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485
| | ||| || || ||||| ||||||| || || |||| || || ||||| ||
Sbjct 5179585 AGAGTGTCGGGGAGGCATGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCG 5179644
Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545
| |||| ||||| || || || | ||| |||||||| ||||| || || ||||
Sbjct 5179645 CTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTC 5179704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468484770412400
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