Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq15 111 2e-19 >seq15 Length=11516971 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 2476757 ACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 2476816 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| ||||| || |||||| ||||||| | |||||||| || || |||||||| || Sbjct 2476817 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTT 2476876 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | |||||| ||||||||||||||| || | Sbjct 2476877 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGAT 2476936 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| |||| |||||||| || || ||||| Sbjct 2476937 GGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2476972 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 2476985 ACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 2477044 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| ||||| || |||||| ||||||| | |||||||| || || |||||||| || Sbjct 2477045 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTT 2477104 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | |||||| ||||||||||||||| || | Sbjct 2477105 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGAT 2477164 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| |||| |||||||| || || ||||| Sbjct 2477165 GGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477200 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 2477213 ACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 2477272 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| ||||| || |||||| ||||||| | |||||||| || || |||||||| || Sbjct 2477273 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTT 2477332 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | |||||| ||||||||||||||| || | Sbjct 2477333 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGAT 2477392 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| |||| |||||||| || || ||||| Sbjct 2477393 GGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477428 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 2477441 ACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 2477500 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| ||||| || |||||| ||||||| | |||||||| || || |||||||| || Sbjct 2477501 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTT 2477560 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | ||||| ||||||||||||||| || | Sbjct 2477561 GTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGAT 2477620 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| |||| |||||||| || || ||||| Sbjct 2477621 GGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496021617532000