Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq11 623 2e-173 seq15 120 4e-22 >seq11 Length=11238946 Score = 623 bits (690), Expect = 2e-173 Identities = 1331/1972 (67%), Gaps = 17/1972 (1%) Strand=Plus/Plus Query 78966 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCT 79025 |||||||||||| | || || | | |||| || || || || ||||| || || Sbjct 5178200 CTGAATGGATCCGTTGTGAGCGATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCCCT 5178259 Query 79026 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 79085 ||| || | || | ||||| || || || || | || || || || |||| || || Sbjct 5178260 CTCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCT 5178319 Query 79086 CCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGC 79145 || ||||| || || ||||| || | ||| | || || || || |||| || || || Sbjct 5178320 GCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGC 5178379 Query 79146 AGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGAT 79205 ||||| || || ||||| || || | | | ||| || || | |||| ||| Sbjct 5178380 GGTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGAT 5178439 Query 79206 TTTATCTTTTAG-AGATTCCCAATCCCAAAGATCAGACGG-GACAACATTCCAAAGATCA 79263 ||| || ||||| || |||| | ||| | || || | || | | | | ||| | || Sbjct 5178440 TTTTTCCTTTAGCAGCTTCC-AGTCCAACAGGTCGGTGGGCGTCTTC-TCCCACATGTCG 5178497 Query 79264 TATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTT 79323 || || || || || || || | || ||| ||| ||||| || || || || Sbjct 5178498 TACTGAAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCG 5178557 Query 79324 TCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTA 79383 | || | || || |||||||| | ||| |||| || ||||| ||||| |||| | Sbjct 5178558 GCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTG 5178617 Query 79384 TTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 79443 || ||| || ||||| |||| || || || ||| | ||| || || ||||| || Sbjct 5178618 TTCAGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCC 5178677 Query 79444 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGA 79503 || || || ||||| || || || || || || | ||| || || | |||||||| || Sbjct 5178678 AAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGC 5178737 Query 79504 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACA 79563 | ||||| |||||||||||||| || || || | || |||| | ||| ||| |||| Sbjct 5178738 ACTGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACA 5178797 Query 79564 TCCTTTAGTTTGAGAAAATCAAAT---CGTCCATCTATTACAAACATGTTCAACGCGACA 79620 | |||||| |||| ||||| || || | | || ||||||| | ||||| Sbjct 5178798 GCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACATGTTGAGTGCGACG 5178857 Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATTTCAGTGCA 79679 || |||||||||||||| |||||||| | || | | |||| | ||||| ||||| Sbjct 5178858 GAGGCCAGATTACAAACCGCTACCTCGTC-GCTGCTGGTGTATTCCACAATTTCTGTGCA 5178916 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 || || || | ||| ||||| || | ||| || || || ||||| | || || ||||| Sbjct 5178917 TAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATC 5178976 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799 || || || ||| | ||||| || |||||| |||| || ||||| || || | ||| || Sbjct 5178977 TTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAAC 5179036 Query 79800 GACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATT--GTGTATATAAT 79857 | ||||| | | | |||| | |||| | ||||||| ||||| | | Sbjct 5179037 CTGCTGGGCCTTCACCACACGCTTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTT 5179096 Query 79858 CGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAAC 79917 | || ||||| || ||||| || | | || ||||||||||| |||||||| | Sbjct 5179097 C--TCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATTAGA 5179154 Query 79918 GACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TAT 79976 ||||| || | | || || | ||||| || | ||||| ||||| | | | || Sbjct 5179155 GACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCCACATACCGTAG 5179214 Query 79977 AAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 80036 ||| || ||||||| ||| |||||||| ||||| || ||||| || | || ||||| | Sbjct 5179215 AAA-AGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTC 5179273 Query 80037 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCC 80096 | ||||| |||||||| ||||||| ||| ||||| | | | || || | |||||||| Sbjct 5179274 AAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTTCC 5179333 Query 80097 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 80156 ||||| || | || | |||||||| || |||||||||| ||| || | || ||||| Sbjct 5179334 ACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATT 5179393 Query 80157 GGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAG 80216 ||| | |||||||| || | ||| || ||||| | | | || || | | | Sbjct 5179394 GGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGATCTGATGCAGCTGACGGCCAC 5179453 Query 80217 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 80276 ||| ||||| || ||| || ||||| | ||||| |||| | ||| ||||| ||||| Sbjct 5179454 ACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCC 5179513 Query 80277 CTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 80336 ||| ||||| ||||| ||||| || || || ||||| |||| || | | | || Sbjct 5179514 CTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGT 5179573 Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 80396 || |||||||| | || || || || || || ||||| || || ||||| || ||||| Sbjct 5179574 ACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCACTTCTCTGACAGCAGGTTGTA 5179633 Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACAT 80456 || ||||| |||| || ||||| |||||| || || || | || | ||| | ||| Sbjct 5179634 GGTTTCAATCGCTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCAT 5179693 Query 80457 GTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGT 80516 |||||| |||| || | | ||| || || ||||||| ||| || |||| || Sbjct 5179694 GTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCCAGGGT 5179753 Query 80517 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 80576 |||||| || || | ||||||||||| || || || || || || ||||||| || Sbjct 5179754 TTTAAAGCCGAAGAAATTGTATGAAAAATCACGGTCATATATTATGGCCGAGTTCAGGCG 5179813 Query 80577 ATCCTTATATTTGTTAACTACATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCC 80635 || || | | | || | || | || | ||| || | || ||||| || | Sbjct 5179814 GTCTTTGTTCTGGAGGACGATGTCAAGCGT-CTCCTTGGAGACCATGGGAGAGTGACGCT 5179872 Query 80636 CATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttG 80695 |||| || || | |||||| | | ||||||||||| ||||| || | || |||| Sbjct 5179873 TATTTAGTGGGTTTATGTAGTTGTACAGGTCCTCCATCACGTCACTGAACACCTTCTTTG 5179932 Query 80696 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTT 80755 | |||||||| || ||||| ||||| || | || || | ||||| || || || |||| Sbjct 5179933 TCTCCTTGTGCAGGTTTGAGACGGCGATCCGTGCAGCGAGGATGGCGTAGTCAGGGTGTT 5179992 Query 80756 GTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTC 80815 || || ||| || | || || ||||||| ||||| | || ||||| || |||| Sbjct 5179993 TGGTGGTCAGAGTAGCAGAGATCTCTGCTGCCAAGGTGTCGAGCTCCACCGTGGTGACTC 5180052 Query 80816 CATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGT 80875 |||| || | || ||||| |||||||| | || | || || | | |||| || Sbjct 5180053 CATTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCTGGGTCCACAAAGTCAGCGT 5180112 Query 80876 TTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGAC 80927 ||| ||| || || | || || ||||| ||||||||||| |||||||| Sbjct 5180113 TTAGGCCGTAGCACAGCTTCTGGATGCGAGAGGTGATTTTATCGAACATGAC 5180164 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| ||||| || ||||||||| ||| | || ||||| || ||||| | Sbjct 5177937 TCCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGT 5177996 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| ||| || || || ||||||||||| || | ||| || ||||| || ||||| || | Sbjct 5177997 TCAGAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 5178056 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | |||||||| | ||||||||| | |||| | || | ||||| Sbjct 5178057 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCACGTCGTTTGGAA 5178107 >seq15 Length=11516971 Score = 120 bits (132), Expect = 4e-22 Identities = 126/166 (76%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 80678 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAA 80737 ||||||| | ||| || || || ||||||||||| || ||||| || | || || | | Sbjct 9314594 CACTAAAGACTTTCTTGGTCTCTTTGTGTAGATTGGACACGGCGATCCGTGCAGCCAGGA 9314653 Query 80738 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 80797 |||||||||| |||| || || ||| ||||||||| | || |||||||||||||||| Sbjct 9314654 TGGCATAATCAGGATATTTGGTGGTAAGAGTGGCTGCAGTCTCTGCTGCCAGAGTGTCCA 9314713 Query 80798 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 80843 || || || || |||||| | || | || ||||| |||||||| Sbjct 9314714 GCTCCACTGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 9314759 Score = 114 bits (126), Expect = 2e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||||||||||||||| || || ||||| | ||| | || |||||||||| || ||| Sbjct 9313263 ACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTGC 9313322 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 ||||| || || || |||||||| || || |||||||| | | ||| ||||||||||| Sbjct 9313323 TCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGGC 9313382 Query 80059 TCCAAGTA 80066 |||| ||| Sbjct 9313383 TCCAGGTA 9313390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718207432909400