Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq11 621 5e-173
seq15 129 8e-25
>seq11
Length=11238946
Score = 621 bits (688), Expect = 5e-173
Identities = 1340/1992 (67%), Gaps = 23/1992 (1%)
Strand=Plus/Plus
Query 71049 CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT 71108
|||||||||||| | || || | | ||||||| || || || ||||| || ||
Sbjct 5178200 CTGAATGGATCCGTTGTGAGCGATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCCCT 5178259
Query 71109 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCT 71168
||| || | || | ||||| ||||| || || | || || || || |||| || ||
Sbjct 5178260 CTCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCT 5178319
Query 71169 ACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGC 71228
|| ||||| || || ||||| || | ||| | ||||| || || |||| || || ||
Sbjct 5178320 GCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGC 5178379
Query 71229 AGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGG-- 71286
||||| || || ||||| || || | | ||||| || || | || ||| | ||
Sbjct 5178380 GGTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCC--GTGCTTGGCG 5178437
Query 71287 ATTTTATCTTTTAG-AGATTCCCAATTCCAA-AGATCCGATGGTACAACNNNNNNNNNNN 71344
||||| || ||||| || |||| | ||||| || || | ||
Sbjct 5178438 ATTTTTTCCTTTAGCAGCTTCC--AGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGT 5178495
Query 71345 NNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTT 71404
||||| || || | || ||| | || || |||||||| || |
Sbjct 5178496 CGTACTGAAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCT 5178555
Query 71405 TTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCT 71464
| || || || || |||||||| | ||| | || || ||||| ||||| ||||
Sbjct 5178556 CGGCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGG 5178615
Query 71465 TATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTG 71524
| || ||| || ||||| ||||| || || || ||| | ||| || || ||||| |
Sbjct 5178616 TGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGG 5178675
Query 71525 CTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTG 71584
| || || || || || || || || || ||||| | ||| || || | |||||||| |
Sbjct 5178676 CCAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGG 5178735
Query 71585 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCA 71644
| | ||||| |||||||||||||| || || || | ||| |||| | ||| ||| ||
Sbjct 5178736 GCACTGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCA 5178795
Query 71645 CATCCTTTAGTTTGAGAAAATCAAATCTCC---CATCTATTACAAACACGTTCAAGGCAA 71701
|| | |||||| |||| ||||| ||| || | | || ||| ||| | || |
Sbjct 5178796 CAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACATGTTGAGTGCGA 5178855
Query 71702 CAGATGCCAGATTACAAACGGCTACCTCATTAGCATC-GGCATATTGTATAATTTCAGTG 71760
| || |||||||||||||| |||||||| | || | || |||| | |||||| |||
Sbjct 5178856 CGGAGGCCAGATTACAAACCGCTACCTCGTC-GCTGCTGGTGTATTCCACAATTTCTGTG 5178914
Query 71761 CAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 71820
|| ||||| || | ||||||||| || | ||| || || || ||||| | || || |||
Sbjct 5178915 CATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCA 5178974
Query 71821 TCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 71880
|| || || || || | ||||| || |||||| |||| || ||||| || || | |||
Sbjct 5178975 TCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAA 5179034
Query 71881 ACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATT--GTGTATATA 71938
|| | ||||| | | | |||| | |||| | ||||||| ||||| |
Sbjct 5179035 ACCTGCTGGGCCTTCACCACACGCTTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGC 5179094
Query 71939 ATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGG-ACATTCATTCGGACACATC 71997
|| || ||||| || ||||| ||| | | | || || |||||| | ||||||||
Sbjct 5179095 TTC--TCAAACTCCTCCCCCCA-GCACTCATTCAGCCCGGGACATTCGTCTGGACACATT 5179151
Query 71998 AATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 72056
| ||||| || | | | || | ||||| || | ||||| ||||| | | |
Sbjct 5179152 AGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCCACATACCG 5179211
Query 72057 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 72116
|| ||| || ||||||| ||| |||||||| ||||| || ||||| || | || |||||
Sbjct 5179212 TAGAAA-AGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAA 5179270
Query 72117 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTT 72176
| | ||||| |||||||| ||||||| ||| ||||| | | | || |||| |||||
Sbjct 5179271 GTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTT 5179330
Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236
||| ||||| || | || | |||||||| || |||||||||| ||| || | || ||
Sbjct 5179331 TCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCC 5179390
Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296
|||||| |||||||| || | ||| || ||||| | | | || ||| | |
Sbjct 5179391 ATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGATCTGATGCAGCTGACGGC 5179450
Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356
| ||| ||||| || ||| || ||||| | ||||| |||| | ||| ||||| ||
Sbjct 5179451 CACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAAT 5179510
Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 72416
|||||| || || |||||| ||||| || || || ||||| |||| || | | |
Sbjct 5179511 GCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTT 5179570
Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 72476
|| || |||||||| | || || || || || || ||||| || || ||||| || ||
Sbjct 5179571 GGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCACTTCTCTGACAGCAGGTT 5179630
Query 72477 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAA 72536
||| || ||||| |||| || ||||| |||||| || || || | || | ||| |
Sbjct 5179631 GTAGGTTTCAATCGCTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAG 5179690
Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596
||| ||||| |||| || | | ||| || || ||||||| |||||| ||||
Sbjct 5179691 CATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCCAG 5179750
Query 72597 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656
|||||||| || || | ||||||||||| || || || || || || |||| || ||
Sbjct 5179751 GGTTTTAAAGCCGAAGAAATTGTATGAAAAATCACGGTCATATATTATGGCCGAGTTCAG 5179810
Query 72657 TTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTT 72715
|| || | | | || || || | || | ||| || | || ||||| ||
Sbjct 5179811 GCGGTCTTTGTTCTGGAGGACGATGTCAAGCGT-CTCCTTGGAGACCATGGGAGAGTGAC 5179869
Query 72716 TCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttt 72775
| |||| || || | |||||| | | ||||||||||| ||||| || | || |
Sbjct 5179870 GCTTATTTAGTGGGTTTATGTAGTTGTACAGGTCCTCCATCACGTCACTGAACACCTTCT 5179929
Query 72776 ttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGAT 72835
|||| |||||||| || ||||| ||||| || | || || || ||||| || || || |
Sbjct 5179930 TTGTCTCCTTGTGCAGGTTTGAGACGGCGATCCGTGCAGCGAGGATGGCGTAGTCAGGGT 5179989
Query 72836 GTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTA 72895
||| || || ||| || | || |||||||||| ||||| | || ||||| || |
Sbjct 5179990 GTTTGGTGGTCAGAGTAGCAGAGATCTCTGCTGCCAAGGTGTCGAGCTCCACCGTGGTGA 5180049
Query 72896 CTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAG 72955
||||||| || | || ||||| |||||||| | || | || || | | ||||
Sbjct 5180050 CTCCATTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCTGGGTCCACAAAGTCAG 5180109
Query 72956 TGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATAACATTTT 73015
||||| ||| || || | || || ||||| ||||||||||| ||||| || |
Sbjct 5180110 CGTTTAGGCCGTAGCACAGCTTCTGGATGCGAGAGGTGATTTTATCGAACATGACGCGCT 5180169
Query 73016 CCCGGCATCCAT 73027
|| ||| |||||
Sbjct 5180170 CCTGGCGTCCAT 5180181
Score = 114 bits (126), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927
|||| ||||| || ||||| || ||||||||| |||| | || || || ||||| || |
Sbjct 5177937 TCCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGT 5177996
Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987
||| ||||| || || ||||||||||| || | ||| || ||||| || ||||| || |
Sbjct 5177997 TCAGAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 5178056
Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038
| || | |||||||| | ||||||||| | |||| | || | |||||
Sbjct 5178057 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCACGTCGTTTGGAA 5178107
>seq15
Length=11516971
Score = 129 bits (142), Expect = 8e-25
Identities = 128/166 (77%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820
||||||| | ||| || || || ||||||||||| || ||||| || | || || || |
Sbjct 9314594 CACTAAAGACTTTCTTGGTCTCTTTGTGTAGATTGGACACGGCGATCCGTGCAGCCAGGA 9314653
Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880
|||||||||| |||| || || ||| ||||||||| | |||||||||||||||||||
Sbjct 9314654 TGGCATAATCAGGATATTTGGTGGTAAGAGTGGCTGCAGTCTCTGCTGCCAGAGTGTCCA 9314713
Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926
|| || || || |||||| | || | || ||||| ||||||||
Sbjct 9314714 GCTCCACTGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 9314759
Score = 114 bits (126), Expect = 2e-20
Identities = 102/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
||||||||||||||||| || || ||||| | ||| | || |||||||||| || |||
Sbjct 9313263 ACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTGC 9313322
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
||||| || || || |||||||| || || |||||||| | | ||| |||||||||||
Sbjct 9313323 TCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGGC 9313382
Query 72142 TCCAAGTA 72149
|||| |||
Sbjct 9313383 TCCAGGTA 9313390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671081859544600
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