Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq11 154 2e-32
seq15 87.8 3e-12
seq10 86.0 9e-12
>seq11
Length=11238946
Score = 154 bits (170), Expect = 2e-32
Identities = 376/564 (67%), Gaps = 18/564 (3%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| || |||||| ||| ||| || || || ||||| ||| | ||||| | ||||
Sbjct 5179408 ACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACAACACCGCACGC 5179349
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|| || ||||| || || || |||| || ||| | ||| | ||| ||||||| |||
Sbjct 5179348 TATGTGGACCAGGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACCTGGAACCCTGG 5179289
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
|| | || | |||||||| | ||| || || ||| |||| || ||| ||
Sbjct 5179288 CATTCCGATATATTTGACTTCCTGGAGTTGAAGAAGAACACTGGAAAAGAGGAGCAGAGA 5179229
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
||||| ||| | || || | | ||| | || || |||||||||||| | || | ||
Sbjct 5179228 GCCAGAGACCTTTTCTACGGTATGTGGATCCCTGACTTGTTCATGAAGAGGGTGGA-GA- 5179171
Query 97047 GGTGGCTA---CTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103
|| | | |||| |||||||| || ||| | ||||| ||| || ||||||
Sbjct 5179170 -GTAACCAGGACTGGTCTCTAATGTGTCCAGACGAATGTCCCGGGCTGAATGAGTGCTGG 5179112
Query 97104 GGCGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160
|| || ||||||||| ||| ||||| |||||| |||| ||||| ||| |
Sbjct 5179111 GGGGAGGAGTTTGAG---AAGCTCTACACCAAATACGAGAAAGAAGGCCG---CGTCAAG 5179058
Query 97161 CGAGTCG---ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGA 97217
|| || | | || | | | ||| | |||||| | | | ||| || || ||
Sbjct 5179057 CGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATAGAGTCCCAGACTGAAACCGGC 5178998
Query 97218 ACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGC 97277
||||| ||||| |||||||| ||| || ||| | || |||||||| | | |||||
Sbjct 5178997 ACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAGAGCAACCAGCAGAATCTGGGC 5178938
Query 97278 ACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACG 97337
||||||||| || |||||| ||||| |||||||| || ||| || ||||||
Sbjct 5178937 ACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAATACACCAGCAGCGACGAGGTA 5178878
Query 97338 GCAGTTTGCGTTCTGGCATCGGTC 97361
|| ||||| |||||| || |||
Sbjct 5178877 GCGGTTTGTAATCTGGCCTCCGTC 5178854
>seq15
Length=11516971
Score = 87.8 bits (96), Expect = 3e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238
|||||| | |||||| | | |||| ||| || || || || ||||| |||||||||
Sbjct 9312971 CTGTGGTACGCCATCATCGAGTCTCAAACAGAAACCGGCACACCATACATGCTCTACAAG 9312912
Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298
|| || || | || |||||||| | || ||||||||||||| | |||||||
Sbjct 9312911 GACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAATCTG 9312852
Query 97299 TGCACGGAAATTGTAGAGTAC 97319
||||| || ||||||||||||
Sbjct 9312851 TGCACAGAGATTGTAGAGTAC 9312831
>seq10
Length=9126174
Score = 86.0 bits (94), Expect = 9e-12
Identities = 118/160 (74%), Gaps = 4/160 (3%)
Strand=Plus/Plus
Query 69962 GGATCGACCAATGCCAAAGAGCTGAGCCGA-AAGGGTGTACACATTTGGAGCGGCAACAG 70020
||||| || |||||||||||||| | || || || ||| | |||||| | |||| |
Sbjct 6095989 GGATCCACAAATGCCAAAGAGCTCT-CAGAGAAAGGAGTAAAGATTTGGGAAGCCAACGG 6096047
Query 70021 TAGTCGAAGCGTTT-TGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGC 70079
| | | || ||| |||| || || |||||||| || | ||||| |||||||| |
Sbjct 6096048 TTCTAGG-GCTTTTCTGGACAATCTGGGGCTCACCGACCGAGAGGAGGGAGATCTGGGCC 6096106
Query 70080 CAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTA 70119
| |||||||| |||||||||||||||| || || ||||
Sbjct 6096107 CTGTGTACGGGTTCCAGTGGAGGCACTTTGGTGCCGAGTA 6096146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740995885754600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |