Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq10 131 1e-25
>seq10
Length=9126174
Score = 131 bits (144), Expect = 1e-25
Identities = 132/169 (78%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
||||| ||||||||| || || || | ||||||||||||||||||||| || || || ||
Sbjct 6096156 CATGTTCGTGTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATC 6096097
Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891
||| || || | || | |||||| || |||| ||| | || ||||| ||||| |
Sbjct 6096096 TCCCTCCTCTCGGT-CGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTT 6096038
Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940
|||| |||||||| || ||||| ||||||||||||| |||||||| ||
Sbjct 6096037 CCCAAATCTTTACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCC 6095989
Score = 113 bits (124), Expect = 3e-20
Identities = 114/147 (78%), Gaps = 1/147 (1%)
Strand=Plus/Minus
Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565
|| |||||||| || || || |||||||||||||| ||||| ||||||| |||||
Sbjct 6096586 GCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAAGGGCACCCCGAGGCCCATA 6096527
Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625
| ||||||| | |||||| ||||| ||||| ||||| |||| | |||||| ||||| ||
Sbjct 6096526 T-CCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCACACACGTAGAACTGGCA 6096468
Query 25626 CATGGTGTAGCACGGAGGAAGAGCTAT 25652
|| | || ||| || || ||||| ||
Sbjct 6096467 CAGAGCGTGGCAGGGTGGCAGAGCCAT 6096441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340109266006455
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |