Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq10 131 1e-25 >seq10 Length=9126174 Score = 131 bits (144), Expect = 1e-25 Identities = 132/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||| ||||||||| || || || | ||||||||||||||||||||| || || || || Sbjct 6096156 CATGTTCGTGTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATC 6096097 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 ||| || || | || | |||||| || |||| ||| | || ||||| ||||| | Sbjct 6096096 TCCCTCCTCTCGGT-CGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTT 6096038 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||| |||||||| || ||||| ||||||||||||| |||||||| || Sbjct 6096037 CCCAAATCTTTACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCC 6095989 Score = 113 bits (124), Expect = 3e-20 Identities = 114/147 (78%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| || || || |||||||||||||| ||||| ||||||| ||||| Sbjct 6096586 GCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAAGGGCACCCCGAGGCCCATA 6096527 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | ||||||| | |||||| ||||| ||||| ||||| |||| | |||||| ||||| || Sbjct 6096526 T-CCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCACACACGTAGAACTGGCA 6096468 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTAT 25652 || | || ||| || || ||||| || Sbjct 6096467 CAGAGCGTGGCAGGGTGGCAGAGCCAT 6096441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340109266006455