Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq1303 150 3e-31
seq21 84.2 3e-11
>seq1303
Length=194977
Score = 150 bits (166), Expect = 3e-31
Identities = 196/271 (72%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 8705 ACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCAAACCCCACGTCT 8764
|| ||| | ||||| || ||| | || || | |||||||| | || ||||| | |
Sbjct 52541 ACATTGTTGCAGACGAGCATCTGCAGCGTGGCGGTGTTGACGATGTCGAAGCCCACTTTT 52600
Query 8765 CCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8824
|| ||||| ||||||||||||||||| |||| ||||||||| ||| |||| | |||
Sbjct 52601 CCTCCGAATGTGCTGGGTTTCCAGTATTCCGGAGAGCAGATGGGGTTTCCCATTAAGCCC 52660
Query 8825 TTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8884
||||| ||| | || ||||||| || | | | |||| || ||||||||||| | | |
Sbjct 52661 TTGAGAGAATAGGGGGCCCCCATTTCCACCAGGGTCTCCCCAAAGATGGCGTTAGTCCTG 52720
Query 8885 GGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAGGGCC 8944
||||| ||||||| | || ||||| | ||||||||| |||| || ||||| | |
Sbjct 52721 GGCTTCTCCACCAGCAGACCTGTGTAGAGCTCCACAGCATCGACGTGGCCGTACATTTCT 52780
Query 8945 CTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975
|| || || || ||||| || |||||||
Sbjct 52781 TCAAGCTCTGCTGCCATTTCTTTCTCTCCTG 52811
Score = 104 bits (114), Expect = 3e-17
Identities = 162/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681
|| || || |||||||| ||||| |||||| ||| ||||| || | ||||
Sbjct 54188 ATCAGCCGCGTGGTCTGGAACAGCCTTTCGTCGTCCCAGTCTGGGTGAACCTCCTTCAAC 54247
Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741
|| || ||||| | ||||||||||| ||||||||||| || |||||||| || || ||
Sbjct 54248 ACGTCACACACCCGGTTGTGTTCCCGAAGCCAGATAGTGGCATACATCATCAGGCCCGGT 54307
Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801
||||| || || ||||| ||||| || || || || | ||||| | | ||| ||
Sbjct 54308 ACCAGACCGAAGGCCTCGTGACCCACCGCGAGGCGTTCAGACTCGGGAATGTTGGGGGGG 54367
Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGT 9853
||| ||||| || || || || || | || || |||| ||| ||||
Sbjct 54368 TAGTGCATGTCAGCCCCCACGTCCTTCACTGTTGGCGGGTACACTTCCCCGT 54419
>seq21
Length=14900632
Score = 84.2 bits (92), Expect = 3e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 8762 TCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGG 8821
||||| || ||||||||||| |||||||| | |||||||||||| || | | |||
Sbjct 10788809 TCTCCCCCAAAGGTGCTGGGCTTCCAGTACTCTGGGGAGCAGATGGGATTTCCAAACAGG 10788750
Query 8822 CCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGA 8881
||||||||||| || |||| |||| ||| | || ||||| || || ||| ||| |
Sbjct 10788749 CCTTTGAGGGAGAAAGGAGAGCCCATCTCCACCATACTCTCTCCAAATATGCTGTTAGAG 10788690
Query 8882 CGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAG 8940
| | || |||| | | || | ||| || || | || || ||||| ||||| ||
Sbjct 10788689 TGTGTTTTCTCCAGTATCAGCCCAGGGTAAAATTCTAAGGCATCTATGTCACCGTACAG 10788631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708464265412400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |