Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq1303 150 3e-31 seq21 84.2 3e-11 >seq1303 Length=194977 Score = 150 bits (166), Expect = 3e-31 Identities = 196/271 (72%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 8705 ACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCAAACCCCACGTCT 8764 || ||| | ||||| || ||| | || || | |||||||| | || ||||| | | Sbjct 52541 ACATTGTTGCAGACGAGCATCTGCAGCGTGGCGGTGTTGACGATGTCGAAGCCCACTTTT 52600 Query 8765 CCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8824 || ||||| ||||||||||||||||| |||| ||||||||| ||| |||| | ||| Sbjct 52601 CCTCCGAATGTGCTGGGTTTCCAGTATTCCGGAGAGCAGATGGGGTTTCCCATTAAGCCC 52660 Query 8825 TTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8884 ||||| ||| | || ||||||| || | | | |||| || ||||||||||| | | | Sbjct 52661 TTGAGAGAATAGGGGGCCCCCATTTCCACCAGGGTCTCCCCAAAGATGGCGTTAGTCCTG 52720 Query 8885 GGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAGGGCC 8944 ||||| ||||||| | || ||||| | ||||||||| |||| || ||||| | | Sbjct 52721 GGCTTCTCCACCAGCAGACCTGTGTAGAGCTCCACAGCATCGACGTGGCCGTACATTTCT 52780 Query 8945 CTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975 || || || || ||||| || ||||||| Sbjct 52781 TCAAGCTCTGCTGCCATTTCTTTCTCTCCTG 52811 Score = 104 bits (114), Expect = 3e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681 || || || |||||||| ||||| |||||| ||| ||||| || | |||| Sbjct 54188 ATCAGCCGCGTGGTCTGGAACAGCCTTTCGTCGTCCCAGTCTGGGTGAACCTCCTTCAAC 54247 Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741 || || ||||| | ||||||||||| ||||||||||| || |||||||| || || || Sbjct 54248 ACGTCACACACCCGGTTGTGTTCCCGAAGCCAGATAGTGGCATACATCATCAGGCCCGGT 54307 Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801 ||||| || || ||||| ||||| || || || || | ||||| | | ||| || Sbjct 54308 ACCAGACCGAAGGCCTCGTGACCCACCGCGAGGCGTTCAGACTCGGGAATGTTGGGGGGG 54367 Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGT 9853 ||| ||||| || || || || || | || || |||| ||| |||| Sbjct 54368 TAGTGCATGTCAGCCCCCACGTCCTTCACTGTTGGCGGGTACACTTCCCCGT 54419 >seq21 Length=14900632 Score = 84.2 bits (92), Expect = 3e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 8762 TCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGG 8821 ||||| || ||||||||||| |||||||| | |||||||||||| || | | ||| Sbjct 10788809 TCTCCCCCAAAGGTGCTGGGCTTCCAGTACTCTGGGGAGCAGATGGGATTTCCAAACAGG 10788750 Query 8822 CCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGA 8881 ||||||||||| || |||| |||| ||| | || ||||| || || ||| ||| | Sbjct 10788749 CCTTTGAGGGAGAAAGGAGAGCCCATCTCCACCATACTCTCTCCAAATATGCTGTTAGAG 10788690 Query 8882 CGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAG 8940 | | || |||| | | || | ||| || || | || || ||||| ||||| || Sbjct 10788689 TGTGTTTTCTCCAGTATCAGCCCAGGGTAAAATTCTAAGGCATCTATGTCACCGTACAG 10788631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708464265412400