Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq11 219 1e-51
seq15 91.5 4e-13
>seq11
Length=11238946
Score = 219 bits (242), Expect = 1e-51
Identities = 615/929 (66%), Gaps = 24/929 (3%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450
||||| | ||| || ||||| |||||||| | ||||| || | | | ||
Sbjct 5179765 TTCGGCTTTAAAACCCTGGAGCGGTCCTACCTGTTGAAGATCAACGGCAAAGTGGCCGAG 5179706
Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510
|| |||||||| ||| | ||| | ||| || | || |||||| | ||| |||||||
Sbjct 5179705 CGACCGCAGCACATGCTCATGAGGGTTTCTGTGGGGATCCATCAAACAGATATTGATGCA 5179646
Query 363511 GCGATTGAAACATATAAGCTTCTA--AGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568
||||||||||| || || || || || | ||| ||||| || ||| | || |||
Sbjct 5179645 GCGATTGAAACCTACAACCTGCTGTCAGAGAA-GTGG-TTCACCCATGCCTCCCCGACAC 5179588
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
| | ||||| || || | |||||| |||| ||||| || || |||||||
Sbjct 5179587 TCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGG 5179528
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
| || ||||||||| || | |||||| || || | || || || || |||||| |
Sbjct 5179527 ATGACAGCATCGAGGGCATTTATGACACGCTGAAACAGTGCGCGCTCATCTCCAAGTCGG 5179468
Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC-GG 363746
| || ||||| ||||| | || | | | | || | | |||||||| ||| ||
Sbjct 5179467 CTGGAGGAATCGGTGTGGCCGTCAGCTGCATCAGATCTACGGGA-AGTTACAT-CGCTGG 5179410
Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806
||| || |||| |||||||| || |||||||| | || | |||| || || |
Sbjct 5179409 CACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACAACACCGCACG 5179350
Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866
|| || |||||||||||| ||| | ||||| || || ||||| || || ||
Sbjct 5179349 CTATGTGGACCAGGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACCTGGAACCCTG 5179290
Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926
||| ||||||| ||||| || || ||| | ||| ||||| ||||||||||| | |
Sbjct 5179289 GCATTCCGATATATTTGACTTCCTGGAGTTGAAGAAGAACACTGGAAAAGAGGAGCAGAG 5179230
Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986
|| | || || ||||| | | ||| | ||||| || |||||| | ||||||
Sbjct 5179229 AGCCAGAGACCTTTTCTACGGTATGTGGATCCCTGACTTGTTCATGAAGAGGGTGGAG-- 5179172
Query 363987 AGGTA--AGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044
|| | || | ||||| || | || ||| |||||||||| || || || |||
Sbjct 5179171 AGTAACCAGGACTGGTCTCTAATGTGTCCAGACGAATGTCCCGGGCTGAATGAGTGCTGG 5179112
Query 364045 GGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT-AAG 364101
|| || || | | | |||||| || ||| || || || ||| | | ||| |||
Sbjct 5179111 GGGGAGGAGTTTGAGAAGCTCTACACCAAA--TACGA----GAAAGAAGGCCGCGTCAAG 5179058
Query 364102 ---ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158
| || ||| || | ||| ||||||||| || || |||| ||| || ||
Sbjct 5179057 CGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATAGAGTCCCAGACTGAAACCGGC 5178998
Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218
|| || || ||| | ||||||||| | ||||| | ||| |||||||||| | || ||
Sbjct 5178997 ACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAGAGCAACCAGCAGAATCTGGGC 5178938
Query 364219 ACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278
|| || || ||||| ||||| || || ||| | ||||||||| |||||||
Sbjct 5178937 ACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAATACACCAGCAGCGACGAGGTA 5178878
Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCT 364307
|| || ||||| || || || |||| ||
Sbjct 5178877 GCGGTTTGTAATCTGGCCTCCGTCGCACT 5178849
>seq15
Length=11516971
Score = 91.5 bits (100), Expect = 4e-13
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 364951 CAGAACATTCCAGGATTTCCA-GAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAAT 365009
||| |||| |||||| ||| || || ||||||| | || |||||||| ||||||||
Sbjct 9311632 CAGGACAT-CCAGGAGATCCCCGATGACCTGAAGCAGCTGTATAAAACCGTGTGGGAAAT 9311574
Query 365010 TTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCA 365069
||| | || || | | ||||| || |||||||| |||| ||| |||||||||
Sbjct 9311573 CTCCCAGAAGACCGTCCTCAAGATGGCAGCAGATCGCGGCGCTTACATCGATCAGAGCCA 9311514
Query 365070 GTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTA 365129
|||| | ||| | ||| | |||| |||| || ||| || || |||||| || ||
Sbjct 9311513 GTCGCTGAACATCCACATCGCAGAGCCGACCTACGGCAAACTGACCAGCATGCACTTTTA 9311454
Query 365130 CGGGTGGAA 365138
||| |||||
Sbjct 9311453 CGGTTGGAA 9311445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303239460844970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |