Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq11 275 6e-69
seq15 113 4e-20
seq6 84.2 2e-11
>seq11
Length=11238946
Score = 275 bits (304), Expect = 6e-69
Identities = 987/1516 (65%), Gaps = 58/1516 (4%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| | ||| ||||| |||| || || | || || | ||| ||| ||| |
Sbjct 5178288 TTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCT 5178347
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| | ||||||||| ||||||||||| || ||||| | ||||||||||| || |
Sbjct 5178348 TCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAG 5178407
Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235
| | | || || | || ||||||||| ||| | |||||||||| ||| |||
Sbjct 5178408 AGCAGACTG--TTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCA 5178465
Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295
| || || ||| || ||||||||||||||||| | ||||||| |||| | |||
Sbjct 5178466 ACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGG 5178525
Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAACTCGCCTCCAG 145353
||||| ||| ||| || ||| || | | || |||||||| |||||||| ||
Sbjct 5178526 AGCCTTCGTAGGTTTCGTA--TGGCCCGAGCTCGGCAGCCAGCTCGCAGCTCGCCTCGAG 5178583
Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413
|| || | || || |||||| || || |||| || ||| ||||| ||| ||
Sbjct 5178584 GGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTC 5178643
Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473
| |||| |||| || | || || ||||| | ||||| | || | || || ||
Sbjct 5178644 GAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGG 5178703
Query 145474 CCGATGTTTCATGTTG-----CTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCG 145528
|| || | ||||| |||| | ||| ||| ||||| | |||| ||
Sbjct 5178704 CCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTA-----ATTAATATCT 5178758
Query 145529 ATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTC-AAAGTC 145587
|| || || ||||||||| || |||||||| || | || || | |||| ||||||
Sbjct 5178759 ATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACA-GCAGCTAGTTTTTGAAAGTC 5178817
Query 145588 AAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAAC 145647
||| || | ||| || || | | |||| |||| || |||| |||||||||
Sbjct 5178818 AAA---AGTCCGCTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAAC 5178874
Query 145648 TGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGAT 145707
|| ||| ||| | | |||||| || || || | ||| | |||||| | |||||
Sbjct 5178875 CGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGAT 5178934
Query 145708 GGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767
||| |||||||| ||||| || || ||||| ||||| || || |||||||||||||| ||
Sbjct 5178935 GGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGG 5178994
Query 145768 TCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGC---GCACGCAC 145824
||| || || ||| | ||| | ||| | ||| | ||||| || |||
Sbjct 5178995 AGTGCCGGTTTCAGTCTGGGACTCTATGATGGCA---TGCCAAACCTGCTGGGCCTTCAC 5179051
Query 145825 CTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACC 145884
| ||| | |||||| |||| |||||||| ||||||||| ||||||| | ||
Sbjct 5179052 CACACGCTTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCC 5179111
Query 145885 GTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGC 145944
|||| || ||| |||||||| | || |||||||| || ||||| | |||
Sbjct 5179112 CCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACT 5179171
Query 145945 GTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--GCGCT 146002
| || | || ||| ||||| || || | ||||| |||| | | ||| | || ||
Sbjct 5179172 CTCCACCCTCTTCATGAACAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCT 5179231
Query 146003 TTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGC 146062
||| ||||| || |||| |||||| | || | | | || || | |||
Sbjct 5179232 CTGC--TCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGC 5179289
Query 146063 CACGGTTCAATATAGACGGCGAGGGCTC----CTTTTCGTTTGCCACCCTGGTCCACGTG 146118
|| ||||| | || | ||||| || | | | | |||| |||||||||||||| |
Sbjct 5179290 CAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTT-CCACCCTGGTCCACATA 5179348
Query 146119 ACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT 146178
||| | ||||||| | || | || |||||| | | || ||| ||| || ||
Sbjct 5179349 GCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGT 5179408
Query 146179 ---AGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC 146235
|| | | || | ||| || | | ||| || ||| |||| || ||
Sbjct 5179409 GCCAGCGATGTAACT--TCCCG-TAGATCTGATGCAGCTGACGGCCACACCGATTCCTCC 5179465
Query 146236 -GCCGTACTTGGATAT-AGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTA 146293
|||| ||||||| || ||| ||||| | ||||| || || ||||| || |||||
Sbjct 5179466 AGCCG-ACTTGGAGATGAGC-GCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTG 5179523
Query 146294 TC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCG 146351
|| |||| ||| ||||||| ||||| | ||| ||| | | | || || ||
Sbjct 5179524 TCATCCTTC--ATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCAT 5179581
Query 146352 AGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCG 146410
|| | |||||| || || || || || || || | || || || |||||
Sbjct 5179582 TAAAGAGTGTCGGGGAGGCATGGGTGAACCACTTCTCTG-ACAGCAGGTTGTAGGTTTCA 5179640
Query 146411 ATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGG 146470
|| || | | ||| || ||| || |||| || || | |||||||||||| ||
Sbjct 5179641 ATCGCTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGC 5179700
Query 146471 GGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAG--CCGTTCTCCAGGGTTTTGT 146528
|| ||||| ||||||| || ||||| |||| ||| ||| ||||||||||||
Sbjct 5179701 GGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCG--CTCCAGGGTTTTAA 5179758
Query 146529 ATCCGAAAAATTTGTA 146544
| ||||| || |||||
Sbjct 5179759 AGCCGAAGAAATTGTA 5179774
>seq15
Length=11516971
Score = 113 bits (124), Expect = 4e-20
Identities = 92/112 (82%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727
|||| | ||| ||||| | ||||| |||||| |||||||||| ||||| || ||||| |
Sbjct 9312830 TGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGT 9312889
Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTC 145779
| || ||||||||||| |||||||||||||||||||| ||| ||| || ||
Sbjct 9312890 TGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTC 9312941
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | || |||||| || | || | ||| |||||||| || |||||||| |||
Sbjct 2476746 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2476805
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || ||||||||||| || |||| | | |||||| || || ||
Sbjct 2476806 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 2476865
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||| | | ||| | || ||| ||| ||| |
Sbjct 2476866 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 2476925
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | ||| || || || || |||||||| || |||||||||
Sbjct 2476926 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2476973
Score = 102 bits (112), Expect = 8e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || | || |||||| || | || | ||| |||||||| || |||||||| |||
Sbjct 2476973 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477032
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| || || ||||||||||| || |||| | | |||||| || || ||
Sbjct 2477033 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477092
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| || ||| | | ||| | || ||| ||| ||| |
Sbjct 2477093 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 2477152
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | ||| || || || || |||||||| || |||||||||
Sbjct 2477153 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477201
Score = 102 bits (112), Expect = 8e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || | || |||||| || | || | ||| |||||||| || |||||||| |||
Sbjct 2477201 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477260
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| || || ||||||||||| || |||| | | |||||| || || ||
Sbjct 2477261 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477320
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| || ||| | | ||| | || ||| ||| ||| |
Sbjct 2477321 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 2477380
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | ||| || || || || |||||||| || |||||||||
Sbjct 2477381 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477429
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || | || |||||| || | || | ||| |||||||| || |||||||| |||
Sbjct 2477429 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477488
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| || || ||||||||||| || |||| | | |||||| || || ||
Sbjct 2477489 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477548
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| || ||| | | ||| | || || ||| ||| |
Sbjct 2477549 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 2477608
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | ||| || || || || |||||||| || |||||||||
Sbjct 2477609 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477657
>seq6
Length=9412079
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||| |||||| ||||| | || | ||| ||||||| || |||||||| ||
Sbjct 6657412 CCACCGGACAAACGGAGCACAAGGTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAG 6657353
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||| | ||||| ||||||||||| || |||| | ||||||||| || ||||||
Sbjct 6657352 AGGGTGTGGCCGTCCTGCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGG 6657293
Query 131128 ATTCCTTCTTTGTC 131141
|| || || || ||
Sbjct 6657292 ATCCCCTCCTTATC 6657279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471972472406400
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