Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq15 100 2e-16
>seq15
Length=11516971
Score = 100 bits (110), Expect = 2e-16
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| |||| || | ||| || | || || ||||||||||| || |||||||||||||
Sbjct 2476975 CCCCCCTC--AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477032
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
| ||| | | || |||| || ||||| ||| | || |||| ||| || || ||
Sbjct 2477033 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477092
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| ||| || ||||| || || || |||||| | | | ||||||| |||||||
Sbjct 2477093 AATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCC 2477150
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||||| || || ||||| ||||| ||||| ||||||||
Sbjct 2477151 ACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477200
Score = 100 bits (110), Expect = 2e-16
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| |||| || | ||| || | || || ||||||||||| || |||||||||||||
Sbjct 2477203 CCCCCCTC--AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477260
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
| ||| | | || |||| || ||||| ||| | || |||| ||| || || ||
Sbjct 2477261 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477320
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| ||| || ||||| || || || |||||| | | | ||||||| |||||||
Sbjct 2477321 AATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCC 2477378
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||||| || || ||||| ||||| ||||| ||||||||
Sbjct 2477379 ACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477428
Score = 98.7 bits (108), Expect = 8e-16
Identities = 146/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||||||||||| | ||| | | || |||| ||
Sbjct 2476770 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGC 2476829
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | || |||| ||| || || || | ||| || ||||| || ||
Sbjct 2476830 TTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTG 2476889
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| |||||| | | | ||||||| ||||||| || | |||||||| || || |
Sbjct 2476890 GC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAG 2476947
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||| ||||| ||||||||
Sbjct 2476948 TCAGGGTTTTTACAAAGATCTGCAT 2476972
Score = 98.7 bits (108), Expect = 8e-16
Identities = 165/236 (70%), Gaps = 6/236 (3%)
Strand=Plus/Plus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| |||| || | ||| || | || || ||||||||||| || |||||||||||||
Sbjct 2477431 CCCCCCTC--AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477488
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
| ||| | | || |||| || ||||| ||| | || |||| ||| || || ||
Sbjct 2477489 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477548
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| ||| || ||||| || || || |||||| | | | ||||| | |||||||
Sbjct 2477549 AATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACATTCTCAATGGTGTCACTGGGCTCC 2477606
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTA 16941
|| | |||||||| || || ||||| ||||| ||||| |||||||| || ||
Sbjct 2477607 ACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATGTTCTA 2477662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405054255536650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |