Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq15 100 2e-16 >seq15 Length=11516971 Score = 100 bits (110), Expect = 2e-16 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | ||| || | || || ||||||||||| || ||||||||||||| Sbjct 2476975 CCCCCCTC--AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477032 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | || |||| || ||||| ||| | || |||| ||| || || || Sbjct 2477033 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477092 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||| || ||||| || || || |||||| | | | ||||||| ||||||| Sbjct 2477093 AATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCC 2477150 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || ||||| ||||| ||||| |||||||| Sbjct 2477151 ACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477200 Score = 100 bits (110), Expect = 2e-16 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | ||| || | || || ||||||||||| || ||||||||||||| Sbjct 2477203 CCCCCCTC--AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477260 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | || |||| || ||||| ||| | || |||| ||| || || || Sbjct 2477261 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477320 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||| || ||||| || || || |||||| | | | ||||||| ||||||| Sbjct 2477321 AATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCC 2477378 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || ||||| ||||| ||||| |||||||| Sbjct 2477379 ACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477428 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||||| | ||| | | || |||| || Sbjct 2476770 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGC 2476829 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || |||| ||| || || || | ||| || ||||| || || Sbjct 2476830 TTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTG 2476889 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | ||||||| ||||||| || | |||||||| || || | Sbjct 2476890 GC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAG 2476947 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| ||||| |||||||| Sbjct 2476948 TCAGGGTTTTTACAAAGATCTGCAT 2476972 Score = 98.7 bits (108), Expect = 8e-16 Identities = 165/236 (70%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | ||| || | || || ||||||||||| || ||||||||||||| Sbjct 2477431 CCCCCCTC--AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477488 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | || |||| || ||||| ||| | || |||| ||| || || || Sbjct 2477489 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477548 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||| || ||||| || || || |||||| | | | ||||| | ||||||| Sbjct 2477549 AATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACATTCTCAATGGTGTCACTGGGCTCC 2477606 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTA 16941 || | |||||||| || || ||||| ||||| ||||| |||||||| || || Sbjct 2477607 ACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATGTTCTA 2477662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405054255536650