Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq11 645 4e-180 seq15 123 3e-23 >seq11 Length=11238946 Score = 645 bits (714), Expect = 4e-180 Identities = 1334/1974 (68%), Gaps = 21/1974 (1%) Strand=Plus/Plus Query 62098 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62157 |||||||||||| | || || | | |||| || || || || ||||| || || Sbjct 5178200 CTGAATGGATCCGTTGTGAGCGATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCCCT 5178259 Query 62158 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62217 ||| || | || | ||||| || || || || | || || || || |||| || || Sbjct 5178260 CTCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCT 5178319 Query 62218 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 62277 || ||||| || || ||||| || | ||| | |||||| || || |||| || || || Sbjct 5178320 GCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGC 5178379 Query 62278 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62337 ||||| || || ||||| || || | | | ||| || || | |||| | ||| Sbjct 5178380 GGTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGAT 5178439 Query 62338 TTTATCTTTTAG-AGGTTCCCAATTCCAA-AGATCCGACGGTACAACNNNNNNNNNNNNN 62395 ||| || ||||| || |||| | ||||| || || | || | | Sbjct 5178440 TTTTTCCTTTAGCAGCTTCC--AGTCCAACAGGTCGGTGGG--CGTCTTCTCCCACATGT 5178495 Query 62396 NNT--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCT 62453 | || || || || || ||| | || ||| | || || |||||||| || || Sbjct 5178496 CGTACTGAAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCT 5178555 Query 62454 TCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCT 62513 |||| || || || |||||||| | || |||| || ||||| |||||||||| Sbjct 5178556 CGGCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGG 5178615 Query 62514 TATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTG 62573 | || ||| || ||||| |||| || || || ||| | ||| || || ||||| | Sbjct 5178616 TGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGG 5178675 Query 62574 CTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTG 62633 | || || || ||||| || || || || || || | ||| || || | |||||||| | Sbjct 5178676 CCAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGG 5178735 Query 62634 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCA 62693 | | ||||| |||||||||||||| || || || | ||| |||||| ||| ||| || Sbjct 5178736 GCACTGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCA 5178795 Query 62694 CATCCTTCAGTTTGAGAAAATCAAAT---CGCCCATCTATTACAAACATGTTCAATGCAA 62750 || | ||||| |||| ||||| ||| || | | || ||||||| | ||| | Sbjct 5178796 CAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACATGTTGAGTGCGA 5178855 Query 62751 CAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTG 62809 | || |||||||||||||| |||||||| | || | | |||| | || || ||| Sbjct 5178856 CGGAGGCCAGATTACAAACCGCTACCTCGTC-GCTGCTGGTGTATTCCACAATTTCTGTG 5178914 Query 62810 CAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 62869 || ||||| || | ||||||||| || | ||| || || || ||||| | || || ||| Sbjct 5178915 CATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCA 5178974 Query 62870 TCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 62929 || || || || ||| ||||||| || |||||| |||| || ||||| || || | ||| Sbjct 5178975 TCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAA 5179034 Query 62930 ACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATA--GTGTATACA 62987 || | ||||| | | | ||| | |||| | |||||| ||||| | Sbjct 5179035 ACCTGCTGGGCCTTCACCACACGCTTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGC 5179094 Query 62988 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCA 63047 || || ||||| || ||||| | | ||| || |||||||| || |||||||| | Sbjct 5179095 TTC--TCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATTA 5179152 Query 63048 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 63106 ||||| || || | || ||| | ||||| || | ||||| ||||| | | | | Sbjct 5179153 GAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCCACATACCGT 5179212 Query 63107 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 63166 | ||| || ||||||| ||| || ||||| ||||| || ||||| || | || ||||| Sbjct 5179213 AGAAA-AGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAG 5179271 Query 63167 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63226 | | ||||| |||||||| ||||||| ||| ||||| | | | ||||||| |||||| Sbjct 5179272 TCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTT 5179331 Query 63227 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 63286 || ||||| || | || | |||||||| || |||||||||| ||| || | || ||| Sbjct 5179332 CCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCA 5179391 Query 63287 TTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 63346 ||||| | |||||||| || | ||| || ||||| | | | || || | | Sbjct 5179392 TTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGATCTGATGCAGCTGACGGCC 5179451 Query 63347 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 63406 | ||| ||||| || ||| || ||||| | ||||| |||| | ||| ||||| ||| Sbjct 5179452 ACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATG 5179511 Query 63407 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 63466 ||||| || || |||||| ||||| || || || ||||| |||| || | | | Sbjct 5179512 CCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTG 5179571 Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 || || |||||||| | || || || || || || ||||| || || || || || ||| Sbjct 5179572 GTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCACTTCTCTGACAGCAGGTTG 5179631 Query 63527 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63586 || || ||||| |||| || ||||| |||||| || || || | || | ||| | | Sbjct 5179632 TAGGTTTCAATCGCTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAGC 5179691 Query 63587 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63646 |||||||| |||| || | | ||| ||| || ||||||| |||||| |||| Sbjct 5179692 ATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCCAGG 5179751 Query 63647 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 63706 |||||||| || || | ||||||||||| || || || || || || ||||||| || Sbjct 5179752 GTTTTAAAGCCGAAGAAATTGTATGAAAAATCACGGTCATATATTATGGCCGAGTTCAGG 5179811 Query 63707 TTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATAGGAAAATGTTT 63765 || || | | | || | || | || | ||| || | || ||| | || Sbjct 5179812 CGGTCTTTGTTCTGGAGGACGATGTCAAGCGT-CTCCTTGGAGACCATGGGAGAGTGACG 5179870 Query 63766 CCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 63825 | |||| || || | |||||| | | ||||||||||| ||||| || | || || Sbjct 5179871 CTTATTTAGTGGGTTTATGTAGTTGTACAGGTCCTCCATCACGTCACTGAACACCTTCTT 5179930 Query 63826 tGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 ||| || ||||| || ||||| ||||| || | || || || ||||| || || || || Sbjct 5179931 TGTCTCCTTGTGCAGGTTTGAGACGGCGATCCGTGCAGCGAGGATGGCGTAGTCAGGGTG 5179990 Query 63886 TTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTAC 63945 || || || ||| || | || || ||||||| ||||| | || ||||| || || Sbjct 5179991 TTTGGTGGTCAGAGTAGCAGAGATCTCTGCTGCCAAGGTGTCGAGCTCCACCGTGGTGAC 5180050 Query 63946 ACCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGT 64005 ||||| || | || ||||| |||||||| | || | || || | | |||| Sbjct 5180051 TCCATTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCTGGGTCCACAAAGTCAGC 5180110 Query 64006 GTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 64059 ||||| ||| || || | || || ||||| ||||||||||| |||||||| Sbjct 5180111 GTTTAGGCCGTAGCACAGCTTCTGGATGCGAGAGGTGATTTTATCGAACATGAC 5180164 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| ||||| || ||||| || ||||||||| ||| | || ||||| || ||||| | Sbjct 5177937 TCCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGT 5177996 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||| ||| || || || ||||||||||| || | ||| || ||||| || || || || | Sbjct 5177997 TCAGAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 5178056 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 | || | |||||||| | ||||||||| | |||| | || | ||||| Sbjct 5178057 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCACGTCGTTTGGAA 5178107 >seq15 Length=11516971 Score = 123 bits (136), Expect = 3e-23 Identities = 127/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 ||||||| | ||| || || |||||||||||||| || ||||| || | || || || | Sbjct 9314594 CACTAAAGACTTTCTTGGTCTCTTTGTGTAGATTGGACACGGCGATCCGTGCAGCCAGGA 9314653 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 |||||||||| |||| || || ||| ||||||||| | || |||||||||||||||| Sbjct 9314654 TGGCATAATCAGGATATTTGGTGGTAAGAGTGGCTGCAGTCTCTGCTGCCAGAGTGTCCA 9314713 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 || || || || || ||| | || | || ||||| |||||||| Sbjct 9314714 GCTCCACTGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 9314759 Score = 113 bits (124), Expect = 6e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 63070 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63129 |||||||||||||||||| || || ||||| | ||| | || |||||||||| || || Sbjct 9313262 CACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTG 9313321 Query 63130 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189 ||||| || || || |||||||| || || |||||||| | | ||| ||||||||||| Sbjct 9313322 CTCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGG 9313381 Query 63190 TTCCAAGTATATGGCCATAACTCCAGG 63216 |||| ||| | || | ||||||| Sbjct 9313382 CTCCAGGTACACAGCAAAGGCTCCAGG 9313408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633577864066000