Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 1e-14 >seq11 Length=11238946 Score = 95.1 bits (104), Expect = 1e-14 Identities = 440/690 (64%), Gaps = 15/690 (2%) Strand=Plus/Plus Query 129165 GTAAATGTTGTTGGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGT 129224 ||| |||||| ||||| | | || | || || |||||||| | || || || |||| Sbjct 5178326 GTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGA 5178385 Query 129225 CGCGGTGGGCATGTAAGCCACGCAAAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCttt 129284 ||||||||||| || | | || ||| | || ||||||| || | || Sbjct 5178386 GGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTC 5178445 Query 129285 ttttAATTGTGTCCAGTCCCACA--TCGATGTGGGTGTGTGATTCCACAAGTCGTATTGC 129342 |||| | |||||||| ||| ||| ||||| || | | ||||| |||||| || Sbjct 5178446 CTTTAGCAGCTTCCAGTCCAACAGGTCG--GTGGGCGTCTTCTCCCACATGTCGTACTGA 5178503 Query 129343 AATATACCCAAACTGGCGGGACTGGAAAAGTAGGAATCGTGCACGCCGTAAGCTTTT--G 129400 | || ||| ||| | || | ||||| |||| ||| |||| | Sbjct 5178504 AGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCG--AGCTCGGCAG 5178561 Query 129401 CCAATTCGCAACTCGCTTCCAATGCGCCAAAATAAATTGTTTCGGCAATTTTGGTGTTCA 129460 ||| ||||| ||||| || | || | | || || || ||| || | |||||||| Sbjct 5178562 CCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCA 5178621 Query 129461 ACACTTTGGCCTGGTCGCTTTCGTACGGCATACGCAACATGGCAAATGTGTCGGCCAAAC 129520 | | || | | ||||||| |||| ||||| | | |||| ||||||||||| Sbjct 5178622 GAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAAC 5178681 Query 129521 CTTGAATACCCACACCGATGGGTCGATGTTTTCTATTGGATTTTTGTGCCGACAACAAGG 129580 | || | ||| | || || || | || | ||||| || | || || | Sbjct 5178682 CCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTG 5178741 Query 129581 GATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTATT 129640 ||||||| || || ||||| || ||||| || || ||||| || | || || || Sbjct 5178742 GATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAG 5178801 Query 129641 TTAACATTTCAAAATTGTAC-TCGCCTACATCGATGTCG-ACAAATTGATTGACACAAAT 129698 || ||| ||| | | || || || || || || ||| |||| || || Sbjct 5178802 CTAGTTTTTGAAAGTCAAAAGTCCGCT-CAGCGGTGACGTACATGTTGAGTGCGACG--- 5178857 Query 129699 CGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCA 129758 ||||||| ||| || || || |||| || |||| || |||||||| | ||| Sbjct 5178858 -GAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCA 5178916 Query 129759 CAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATC 129818 | ||| || | || |||||||||| || || || || || ||| | ||||| ||||| Sbjct 5178917 TAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATC 5178976 Query 129819 TTTGTACATCATGTACGGCGTGCCCGTTTC 129848 |||||| | |||||| || ||||| ||||| Sbjct 5178977 TTTGTAGAGCATGTATGGAGTGCCGGTTTC 5179006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419693036001775