Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1310 91.5 3e-13 seq651 91.5 3e-13 seq22 91.5 3e-13 seq20 91.5 3e-13 seq18 91.5 3e-13 seq1 91.5 3e-13 seq3082 89.7 1e-12 seq27 89.7 1e-12 seq21 89.7 1e-12 seq4 87.8 4e-12 seq8 86.0 1e-11 >seq1310 Length=189029 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 43377 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 43318 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 43317 CCCCACGTTGGGC 43305 >seq651 Length=49178 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 9422 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 9363 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 9362 CCCCACGTTGGGC 9350 >seq22 Length=11609757 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 8896421 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 8896480 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 8896481 CCCCACGTTGGGC 8896493 >seq20 Length=13411851 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 12203650 ATGGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 12203591 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 12203590 AGCCCCACGTTGGGC 12203576 >seq18 Length=8053132 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5241566 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5241625 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5241626 CCCCACGTTGGGC 5241638 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5609755 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5609814 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5609815 CCCCACGTTGGGC 5609827 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5626746 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5626687 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5626686 CCCCACGTTGGGC 5626674 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 7139367 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 7139426 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 7139427 CCCCACGTTGGGC 7139439 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4833632 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4833573 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 4833572 CCCACGTTGGGC 4833561 >seq1 Length=23260604 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 18913495 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 18913436 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 18913435 CCCCACGTTGGGC 18913423 >seq3082 Length=12026 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 7162 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7103 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 7102 CCCACGTTGGGC 7091 >seq27 Length=161406 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 117063 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 117122 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 117123 CCCACGTTGGGC 117134 >seq21 Length=14900632 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2993304 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2993363 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2993364 CCCACGTTGGGC 2993375 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2993812 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2993871 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2993872 CCCACGTTGGGC 2993883 >seq4 Length=13818948 Score = 87.8 bits (96), Expect = 4e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||| Sbjct 7348601 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGCGGGTTCGAG 7348542 Query 142563 CCCCACATCGGGCAGA 142578 |||||| | |||| || Sbjct 7348541 CCCCACGTTGGGCGGA 7348526 >seq8 Length=14690302 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 ||||||||||||||||||| |||||| ||||||||||||||| ||| | ||||||||| Sbjct 10284411 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 10284352 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 10284351 TCCCGGCAGAGA 10284340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027746788798235